Gene Rpic12D_4721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4721 
Symbol 
ID8017298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp63487 
End bp64470 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content57% 
IMG OID644828412 
ProductAAA ATPase 
Protein accessionYP_002979612 
Protein GI241589587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.895386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.068339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCAT TTGACCACGC AAACACTCTG TTCGAGTCCG AGGCTGAACG CAACGCCTAT 
AGAGAGGCAG CAGAGCTGGA CCGCATTGTC GTTCTCCACC CGGCCCTATC CAATGCTGTC
ACGGGCATCA AGGGATGCAT CAAGGCCTCC GTTGCCTCGC GCACGCCAGA GTGCTGCATG
TTGCTGGGCG ACGGTGGCAT GGGAAAGACG ACGATCGCCA ACTTGATCAT GACGGGGATG
GCACCTCAAA CTGTCGTGGA GAACGATTGT GAGATCGACA CCATGCCTGC CTTCTATATG
AGTTTGCCTC CGGAGGGGAG GCTGGATGGC TTGACCGAAG AGATGCTTGC CAAGCTGAAC
GACGTCAACC CGCTCGCTGG TTCACCTGTG TCTCGATCCA AACGAATCAA CACGCTGCTC
AAGCGCTGCA GGACCACCAT CGTTTTTATC GACGAATTGC ACAACCTTTC AGTGATCCAA
AAAAAGGACG CCAGGGCCGG GCAAGCCATC TGCAATTGGC TTAAGGAACT GTTCAATGCG
GAGGGGCCCG TGATCTGCCT GGTCGGGACC GATGAGTGCA AGACCATCTT CGACAAAGAT
ACGCAGATGT CCCGGCGCTA CAAAAGCAAG TTCATGTTGA CGCCGCTGCA CCCGGGAACA
GCCGACGAAC CGGGAGAGCT CCAGCGTTTT CTTGGTGTCT TGGCCAGCAA GATCGTTGAG
CGTACTTCGA TCAAATCCAC GCCGAGCTTC AGCGAGTATG GCTTGGCACT GCGGGTGTTC
GCCGCGACAA GGGGGAACAT TGACTACGTT TCCACACTTC TGAAGGTGGC CGCCCGTCAC
ACATTGCTTG GGGGGCGTGA TGTCATCACC AAGACGGATT TGGCATCTGT CTGGGACACC
GGCATATTTG CGGCGCTGTC CGTGACCAAG CAGAACCCGT TCACGATGAG CGGCCCGACT
TTGGCTGCAG CGTTTCGGGG GTGA
 
Protein sequence
MLPFDHANTL FESEAERNAY REAAELDRIV VLHPALSNAV TGIKGCIKAS VASRTPECCM 
LLGDGGMGKT TIANLIMTGM APQTVVENDC EIDTMPAFYM SLPPEGRLDG LTEEMLAKLN
DVNPLAGSPV SRSKRINTLL KRCRTTIVFI DELHNLSVIQ KKDARAGQAI CNWLKELFNA
EGPVICLVGT DECKTIFDKD TQMSRRYKSK FMLTPLHPGT ADEPGELQRF LGVLASKIVE
RTSIKSTPSF SEYGLALRVF AATRGNIDYV STLLKVAARH TLLGGRDVIT KTDLASVWDT
GIFAALSVTK QNPFTMSGPT LAAAFRG