Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6542 |
Symbol | |
ID | 8017065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | - |
Start bp | 259040 |
End bp | 259840 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644828329 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002979529 |
Protein GI | 241554316 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.208097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTCA ATTTCGACCG TCTCGGCTGG TGGAAATACA TCTTGCTGGC GATAACGCTT CTGACTGCGG CCTTCCTGCT GATGCCGATC GTCTTTATCG CGGCGCTCTC CTTCGGCTCC TCGCAGTGGC TGATCTTTCC GCCGCCCGGC TGGACGCTTC AATGGTACAG CGAGCTCTTT GCCGATCCGC GCTGGCTGGA ATCGGCCTGG ACGAGCTTCA AGATCGCGGT CATCGTGACT GTTCTGTCGG TGCTGCTCGG GCTCGTGACC TCCTTCGGGC TGGTGCGCGG TTCGTTCCTG TTCCGCGATG CGCTGAAAGC ACTGTTCCTG ACGCCGATGA TCCTGCCCGT CGTGGTTCTT GCGGTCGCCC TTTATGCCTT CTTTCTGAGG ATCGGCCTTG GCGGCACGTT GGTAGGCTTC GTCATTTCGC ACCTCGTTCT CGCGCTGCCC TTCTCGATCC TCTCCATCTC AAGTGCGCTG GAGGGCTTCG ACAAGTCGAT CGAGGACGCG GCGGTTCTTT GCGGCGCCTC GCCTCTGGAA GCAAAGATCA GGGTCACCCT GCCGGCGATC AGCCATGGGC TGTTTTCGGC GGCCGTCTTC TCGTTCCTGA CTTCCTGGGA CGAGGTGGTG GTGGCAATCT TCATGTCCAG CCCGACCCTG CAGACGCTGC CCGTCAAGGT ATGGGCAACG CTGCGGCAGG ACCTGACGCC CGTTGTCGCT GCGGCGTCGA CCCTTCTCAT CCTTTTGACG ATCCTCTTGA TGGCGCTGGT TGCCGTCGTG CGTAAGGTAC TGAAACAATG A
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Protein sequence | MLLNFDRLGW WKYILLAITL LTAAFLLMPI VFIAALSFGS SQWLIFPPPG WTLQWYSELF ADPRWLESAW TSFKIAVIVT VLSVLLGLVT SFGLVRGSFL FRDALKALFL TPMILPVVVL AVALYAFFLR IGLGGTLVGF VISHLVLALP FSILSISSAL EGFDKSIEDA AVLCGASPLE AKIRVTLPAI SHGLFSAAVF SFLTSWDEVV VAIFMSSPTL QTLPVKVWAT LRQDLTPVVA AASTLLILLT ILLMALVAVV RKVLKQ
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