Gene Rleg_6542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6542 
Symbol 
ID8017065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp259040 
End bp259840 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content60% 
IMG OID644828329 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002979529 
Protein GI241554316 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.208097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCA ATTTCGACCG TCTCGGCTGG TGGAAATACA TCTTGCTGGC GATAACGCTT 
CTGACTGCGG CCTTCCTGCT GATGCCGATC GTCTTTATCG CGGCGCTCTC CTTCGGCTCC
TCGCAGTGGC TGATCTTTCC GCCGCCCGGC TGGACGCTTC AATGGTACAG CGAGCTCTTT
GCCGATCCGC GCTGGCTGGA ATCGGCCTGG ACGAGCTTCA AGATCGCGGT CATCGTGACT
GTTCTGTCGG TGCTGCTCGG GCTCGTGACC TCCTTCGGGC TGGTGCGCGG TTCGTTCCTG
TTCCGCGATG CGCTGAAAGC ACTGTTCCTG ACGCCGATGA TCCTGCCCGT CGTGGTTCTT
GCGGTCGCCC TTTATGCCTT CTTTCTGAGG ATCGGCCTTG GCGGCACGTT GGTAGGCTTC
GTCATTTCGC ACCTCGTTCT CGCGCTGCCC TTCTCGATCC TCTCCATCTC AAGTGCGCTG
GAGGGCTTCG ACAAGTCGAT CGAGGACGCG GCGGTTCTTT GCGGCGCCTC GCCTCTGGAA
GCAAAGATCA GGGTCACCCT GCCGGCGATC AGCCATGGGC TGTTTTCGGC GGCCGTCTTC
TCGTTCCTGA CTTCCTGGGA CGAGGTGGTG GTGGCAATCT TCATGTCCAG CCCGACCCTG
CAGACGCTGC CCGTCAAGGT ATGGGCAACG CTGCGGCAGG ACCTGACGCC CGTTGTCGCT
GCGGCGTCGA CCCTTCTCAT CCTTTTGACG ATCCTCTTGA TGGCGCTGGT TGCCGTCGTG
CGTAAGGTAC TGAAACAATG A
 
Protein sequence
MLLNFDRLGW WKYILLAITL LTAAFLLMPI VFIAALSFGS SQWLIFPPPG WTLQWYSELF 
ADPRWLESAW TSFKIAVIVT VLSVLLGLVT SFGLVRGSFL FRDALKALFL TPMILPVVVL
AVALYAFFLR IGLGGTLVGF VISHLVLALP FSILSISSAL EGFDKSIEDA AVLCGASPLE
AKIRVTLPAI SHGLFSAAVF SFLTSWDEVV VAIFMSSPTL QTLPVKVWAT LRQDLTPVVA
AASTLLILLT ILLMALVAVV RKVLKQ