Gene Rleg_6541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6541 
Symbol 
ID8017064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp257964 
End bp259043 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content60% 
IMG OID644828328 
ProductABC transporter related 
Protein accessionYP_002979528 
Protein GI241554315 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.131089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC CGTTCCTTCA GATCCGCGGA ATACGCAAGG AATACGGCCC GGTCGTCGCC 
GTCCACGACG TCAATCTCGA CGTCCGGCGC GGGGAGTTCC TGACCTTTCT CGGACCGTCC
GGATCCGGCA AAAGCACCAC CCTCTACATC CTGGCCGGTT TTGAAACTCC AACGAAAGGC
GACATCACGC TGGAGGGCAA GACCTTGCTC GACACGCCTT CGCACAAGCG CAACATCGGC
ATGGTGTTCC AGCGCTACAC CCTGTTTCCG CATCTGACGG TGGGCGAAAA CATCGCATTC
CCCCTGAAGG TCAGGCGCAA GTCCAAAGCC GAGGTCGATA GCAAAGTGAA GGAGATGCTG
CGTCTCGTCA GGCTCGAAGG CTTCGAGGAT CGCAAGCCCG CACAAATGTC CGGCGGCCAG
CAGCAGCGCG TCGCCCTTGC CAGAGCCCTT GCCTATGATC CGCCGGTGCT TCTGATGGAC
GAGCCGCTGT CGGCGCTCGA CAAGAAGCTG CGCGAGGAAA TCCAGCATGA GATACGCCGG
ATCCATCAGC AGACCGAAGT GACGATCCTC TATGTCACGC ACGACCAGGA GGAGGCGCTG
CGGCTCTCCG ACCGGATCGC CGTCTTTTCC AAGGGGGTCA TCGACCAGAT CGGCACGGGG
CCGGAACTCT ATGCCAATCC GCGGACCCGC TTCGTGGCCG AATTCATCGG CGACAGCGAC
TTCATTTCCT GCGACCTGCT GTCATCCTCC GATGGGCAGG CCACCATTTC GCTTGGCGGC
GGAAGCGTCT TCAATGACAT TCCGGTGCAT GGAAAAGGAA GCTCCGGGAC AAGGGCAGCC
CTGATGCTGA GGCCTGAGCG CATTCGGTTG TCGCGAAACC AGGTGGCGGG AGCGGGTCTT
GCCGCAACCG TCAGCGACAT TACCTTCCTC GGCAACAATA TTCACGTCTC GACCGAGACG
GCGACGGGTG AGGCGCTGGC GGTTCGTCTG CCGTTTGGTC ATGAGGCTAT CGTCGGGCTC
AGCCGTGGCG ATATAGTCCA TCTGAATTTC GATCCCGGTG CCGCTCACGT ATTCTGTTGA
 
Protein sequence
MKEPFLQIRG IRKEYGPVVA VHDVNLDVRR GEFLTFLGPS GSGKSTTLYI LAGFETPTKG 
DITLEGKTLL DTPSHKRNIG MVFQRYTLFP HLTVGENIAF PLKVRRKSKA EVDSKVKEML
RLVRLEGFED RKPAQMSGGQ QQRVALARAL AYDPPVLLMD EPLSALDKKL REEIQHEIRR
IHQQTEVTIL YVTHDQEEAL RLSDRIAVFS KGVIDQIGTG PELYANPRTR FVAEFIGDSD
FISCDLLSSS DGQATISLGG GSVFNDIPVH GKGSSGTRAA LMLRPERIRL SRNQVAGAGL
AATVSDITFL GNNIHVSTET ATGEALAVRL PFGHEAIVGL SRGDIVHLNF DPGAAHVFC