Gene Rleg_6527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6527 
Symbol 
ID8017187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp242874 
End bp243797 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content61% 
IMG OID644828314 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002979514 
Protein GI241554301 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0292278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTATCCT CGACACTTCG CAGCCGGAGG CGCGCAATCG CGACCGGAGA AGCCGAGCCA 
AAGGGTTGGC TTGGTCTTGC CTTCATCCTG CCGGGCTTGC TGTTCATCGT CGTGCTTTTC
CTCGTGCCGC TTGTCATGAC GGTCTGGATG AGCTTTTACA ATTGGCCGCT TCTCGGCCGG
ACGAAGTTCA TCGGCTTGTC CAACTATGCC GAACTGATCG GCGATACCCA GCTCTGGCAT
TCCCTGGGTT TCACGCTGCT CTACACTGTG CTGGTTACGG TTGCGATCTT CCTGGTGGCC
TTTCCTCTGG CGCTGCTCGT CGACCGGCCG CTGCGGATCG CCGGCTTTTT CCGCACGATC
TATTTCATGC CCGTCGTCAT CGGCTTCGGG GCGGCCTCGA CATTGTGGAT GTGGCTGCTC
AATCCCGATA GCGGCGTCTT TGCGCAGCTG CTACGCGGAG CGGGCATCAT CGACAGCGCG
CCGAGGCCGC TCGAAAGTTT CTGGCCAGCC CTCGGCGTCG TCATCCTGAT GGTCGTCTGG
AAAACAGCGG GCTTCACGAT GATCATCCTC CTGACCGGCC TTCAGAGCAT ATCGAACGAC
GTCATCGAAG CCGCCAGGAT CGACGGCGCC AGTGTCTGGA GCCGGTTTCG CCGGATCACG
CTGCCTTTGA TGAGGAACTC GGTGGTGCTG GCGCTTGTCC TCAACGTCAC CTCGTCGATG
CTGGCCTTCG ACCAGTTCTT CATCATCACC CAGGGCGGCC CTGAGAACAG CACGATCTCG
GCGGTCTTCT CGATCTATCT CGCCTCATTC TCATCCTATC GGCTCGGATA CGGCTCGGCG
ATCTCCTTTG CGTTGCTCGT CGTGCTGGTG GCGATCAGCG CCATCCAGTT CGTCCTGCTG
CGCCAGCGGC CGGAGGAGGG TTGA
 
Protein sequence
MVSSTLRSRR RAIATGEAEP KGWLGLAFIL PGLLFIVVLF LVPLVMTVWM SFYNWPLLGR 
TKFIGLSNYA ELIGDTQLWH SLGFTLLYTV LVTVAIFLVA FPLALLVDRP LRIAGFFRTI
YFMPVVIGFG AASTLWMWLL NPDSGVFAQL LRGAGIIDSA PRPLESFWPA LGVVILMVVW
KTAGFTMIIL LTGLQSISND VIEAARIDGA SVWSRFRRIT LPLMRNSVVL ALVLNVTSSM
LAFDQFFIIT QGGPENSTIS AVFSIYLASF SSYRLGYGSA ISFALLVVLV AISAIQFVLL
RQRPEEG