Gene Rleg_6453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6453 
Symbol 
ID8017121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp171489 
End bp172193 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content62% 
IMG OID644828248 
Productisochorismatase hydrolase 
Protein accessionYP_002979448 
Protein GI241554235 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.344539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0179591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACG CGATGGTCGA AACCAACGGG CATTTTATCG ACGCCGATCC GTATCCGTGG 
CCCTATAATG GCGCTCTGAG GCCTGATAAC ACCGCCCTCA TCATCATCGA CATGCAGACG
GATTTCTGCG GCAAGGGCGG CTATGTCGAC CATATGGGCT ACGACCTGTC GCTGGTGCAG
GCGCCGATCG AACCCATCAA ACGCGTGCTT GCCGCCATGC GGGCCAAGGG CTACCACATC
ATCCACACCC GCGAGGGCCA CCGCCCGGAC CTCGCCGATC TGCCGGCCAA CAAACGCTGG
CGCTCGCAGC GGATCGGCGC CGGCATCGGT GATGCCGGCC CCTGCGGCCG AATCCTGACG
CGTGGCGAAC CGGGCTGGGA CATCATCCCC GAACTCTACC CGATCGAAGG CGAGACGATC
ATCGACAAGC CCGGCAAGGG TTCGTTCTGC GCCACCGACC TCGAACTCAT CCTCAACCAG
AAGCGCATCG AGAACATTAT CCTCACGGGG ATCACCACCG ATGTCTGCGT TTCGACGACG
ATGCGCGAGG CAAACGACCG CGGCTACGAA TGCCTACTTC TGGAGGACTG CTGCGGTGCG
ACCGACTACG GAAACCACCT CGCCGCGATC AAGATGGTGA AGATGCAGGG CGGCGTCTTC
GGCTCGGTCT CCAATTCCGC GGCTCTAGTC GAGGCGCTGC CCTGA
 
Protein sequence
MMDAMVETNG HFIDADPYPW PYNGALRPDN TALIIIDMQT DFCGKGGYVD HMGYDLSLVQ 
APIEPIKRVL AAMRAKGYHI IHTREGHRPD LADLPANKRW RSQRIGAGIG DAGPCGRILT
RGEPGWDIIP ELYPIEGETI IDKPGKGSFC ATDLELILNQ KRIENIILTG ITTDVCVSTT
MREANDRGYE CLLLEDCCGA TDYGNHLAAI KMVKMQGGVF GSVSNSAALV EALP