Gene Rleg_6427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6427 
Symbol 
ID8016926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp143203 
End bp143985 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID644828222 
Productcarnitinyl-CoA dehydratase 
Protein accessionYP_002979422 
Protein GI241554209 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0773565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGAAC CCATTCGCAC ACGACAGGAC GGCGGAGTGC TCGAAGTCGT CATCGACCGG 
CCGAAGGCGA ATGCCATCGA CCTTGCGACC AGCCGTGCTC TGGGGTTGAT CTTCCGAAAT
TTCCGCGACG ATCCGGCGCT GCGCGTCGCC ATCGTGTCGG GCGCCGGCGA GAAGTTTTTC
TGTGCCGGCT GGGATCTCAA GGCGGCGGCA TCAGGTGATG CGGTCGACGG GGACTACGGT
GTGGGCGGCT TCGGCGGGCT GCAGGAACTG CGCGACCTCA ACAAGCCGGT CATTTGTGCG
GTCAACGGTA TCTGTTGCGG CGGCGGTCTG GAGATCGCGC TTTCTGCCGA CCTGATCCTC
GCCGCCGAAC ATGCGACCTT CGCCCTGCCG GAAATCCGCT CCGGCACGGT TGCCGATGCG
GCTTCGATCA AGCTGCCGAA ACGCATCCCC TACCACATCG CCATGGACAT GCTTTTGACC
GGTCGTTGGC TCGACGTTCA CGAGGCGCAT CGCTGGGGTT TTATCAACGA GGTCCTGCCG
GCCGAGCGGC TGATGGAGAG AGCATGGGAG CTTGCCCGGC TGCTTGAGAG CGGGCCGTCG
CTCGTCCATG CGGCCATCAA GGAAATCGTC CGCGAAGCGG AGGGTTCGAC GTTCCAGACT
GCCATGAACA AGATCACCAA ACGGCAGTTT GCGACGGTCG ACAGGCTCTA TTCGAGCGAG
GACCAATTAG AAGGCGCACG GGCCTTCGCC GAGAAGCGAA GCCCCATTTG GAAAGGAAAA
TAG
 
Protein sequence
MSEPIRTRQD GGVLEVVIDR PKANAIDLAT SRALGLIFRN FRDDPALRVA IVSGAGEKFF 
CAGWDLKAAA SGDAVDGDYG VGGFGGLQEL RDLNKPVICA VNGICCGGGL EIALSADLIL
AAEHATFALP EIRSGTVADA ASIKLPKRIP YHIAMDMLLT GRWLDVHEAH RWGFINEVLP
AERLMERAWE LARLLESGPS LVHAAIKEIV REAEGSTFQT AMNKITKRQF ATVDRLYSSE
DQLEGARAFA EKRSPIWKGK