| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6414 |
|---|
| Symbol | |
|---|
| ID | 8016913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012854 |
|---|
| Strand | - |
|---|
| Start bp | 126854 |
|---|
| End bp | 127618 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644828209 |
|---|
| Product | gluconate 5-dehydrogenase |
|---|
| Protein accession | YP_002979409 |
|---|
| Protein GI | 241554196 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0118789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.389185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACT TGTTCGATCT TACCGGACGG CGTGCGCTGA TCACCGGCTC GAGCCAGGGG
ATCGGCTATG CCCTGGCCGA AGGCCTGGCG CAGTATGGCG CCCAAGTCAT CATCAACGGC
CGCACGCCCG AAAGCGTCAA CCGCGCGGTC GAGAGCCTGA AGGATCAAGG CCTGTCTGCC
CATGCGGCGA TCTTCGACGT GACCAGCAAG GACGCTGCCA AAGCGGGTAT CGACGCGATC
GAAGCCGATA TCGGTCCGCT CGACATCCTG ATCAACAATG CCGGCATGCA GTTTCGTACG
CCGCTGGAAG ATTTCCCGGC GGACAAATGG GAGCTGCTGC TGACCACCAA TATTTCGAGC
GTATTTTATG TCGGCCAGGC AGCGGCCAAA CCCATGATCG CCCGCGGACA GGGCAAGATC
ATCAACATCG CCTCCGTGCA AAGCGAACTG GCGCGCCCCG GCATTGCTCC CTATACGGCG
ACCAAGGGCG CGGTGCGCAA TCTGACCCGC GGCATGTGCG CCGACTGGGC CAAGTACGGC
CTGCAGATCA ATGCGATTGC GCCGGGCTAT TTCAAGACGC CGCTCAATCA GGCGCTTGTC
GACAATCCCG AGTTCTCGTC CTGGCTCGAG AAGCGAACGC CGGCCGGACG CTGGGGCAAT
GTCGACGAAC TGGTCGGCGC CGCCGTTTTC CTGTCGGGCC GGGGCTCGTC CTTCATCAAC
GGGCACACGC TTTATGTCGA CGGCGGCATC ACGACCTGCC TCTGA
|
|---|
| Protein sequence | MKNLFDLTGR RALITGSSQG IGYALAEGLA QYGAQVIING RTPESVNRAV ESLKDQGLSA
HAAIFDVTSK DAAKAGIDAI EADIGPLDIL INNAGMQFRT PLEDFPADKW ELLLTTNISS
VFYVGQAAAK PMIARGQGKI INIASVQSEL ARPGIAPYTA TKGAVRNLTR GMCADWAKYG
LQINAIAPGY FKTPLNQALV DNPEFSSWLE KRTPAGRWGN VDELVGAAVF LSGRGSSFIN
GHTLYVDGGI TTCL
|
|---|
| |