Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6390 |
Symbol | |
ID | 8017004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | - |
Start bp | 101763 |
End bp | 103577 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644828185 |
Product | Chloride channel core |
Protein accession | YP_002979385 |
Protein GI | 241554172 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.315587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.638262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGC ATCCACCAAA CAACCGGCCG CACGATTTCA CCGGCGGTCT TTCCCGGCGC GAGGCCGGCG ATTTCACCAC CGACAGGCGG GTCCTCCTCC TGGTCGGCAT GTCCATCATT GTCGGCACCG CCGGCGCGTT TGCCGCCTGG TGTCTCGTCA GCCTCATTGC GCTGGTGACG AATGTCATCT GGTTCGGGCA GATCGGCATC CAGCCTGCCT CTCTGGCTGC GGTGCCGCGC TCGCTGTGGG TGGTGCTTGT TCCGCCGCTG GGTGGACTTG TCATCGGACT GATGGCCCGT TTCGGGTCGG AGAAGATCCG CGGCCACGGC ATTCCCGAGG CGATCGAGGC CATCCTGATC GGCGGCAGCC GGATGTCGCC GAAGGTCGCG GTCCTGAAGC CGCTGTCGTC TGCCATTTCC ATCGGAACCG GCGGCCCGTT CGGCGCCGAG GGGCCGATCA TCATGACCGG CGGTGCGATC GGATCGCTGT TCGCGCAATT CTTTCACATG AGTGCGGCCG AGCGGAAAAC GCTGCTCGTC GCCGGTGCGG CCGCAGGCAT GACGGCGATT TTCGGTTCGC CGATCGCCGC GGTCATGCTG GCGGTCGAAC TGCTGTTGTT CGAATGGAAG CCGCGCAGCT TCATTCCCGT CGCCGTTGCC GCCTGCGTGT CGATCTGCTG GCGCCCGCTG CTGTTCGGCG TCGGCCCGCT GTTCCCGACC CACTTCCAGG TGGCCTTGCC CTGGTGGGGT ATTTTTGCCT GTGCGGCGAT GGGCATCATC TCCGGCCTGC AATCGGGATT GCTGACGACG CTGCTCTACC GGATCGAGGA CCTGTTCGAA GCCTTGCCGA TCCACTGGAT GTGGTGGCCG GCGCTCGGCG GTCTCGTCAT CGGTCTCGGC GGCCTGATCG AACCGCGGGC AATGGGCGTC GGCTACGACA TCATCGATGG CTTGCTCAAC AACCGGCTGC TCGCCCCGGC TGTCATGTCG ATCCTGCTGG TGAAGACGAT CATCTGGCTG TTTGCCCTGT CGTCGGGCAC CTCCGGTGGC GTGCTTGCGC CGCTCCTCAT CTTCGGCGGG GCTCTCGGAT GGCTGGTCGG TCTTGTCATG CCGGGCAATG ATCCCGGCTT CTGGGCGCTG CTCGGAATGG CGGCGATGAT GGGTGGAACC ATGCGTGCAC CGCTGACGGG CACTTTCTTT GCGATGGAGA TCACCGGCGA CGTCAGCACG CTCGTTCCGC TGCTTGCCGC AACCGTGGTG GCCTATGCCG TCACCGTGCT TTTGCTGCGC CGCTCGATCC TGACCGAGAA GATCGCCCGC CGCGGTCAGC ACATCACCCG CGAATATGGC GTCGACCCGT TCGAACTGTC GCGCGCAAGC GAGATCATGA TCAGCGATGT CGACACGCTT CCCGTCGCCA TGACGATGGG AGAGGCCTGC GATTTCTTTG CCTCGCAGCG GAAGACGCAC CGGATCTATC CGGTGGTCGA TGCGACAGGC AGGCTGGCCG GCGTCGTATC GAGAGCCGAC GCTCTGCTCT GGCAGGGGAA TCCGGACCTT GCCAGCCAGA CGCTCGCGGA AAACGTGACG GATGATTCCG TTCCGGTGGG GCATCCTGAT GATACGGTCG CATTCATCGC CGATCTGATG CTGTCGACCG GCGACGGACG CATTCCGATC GTCGATCCGA CCTCAGGGAA ATTGTGCGGC CTGATCGCCC GCAAGGATCT GCTGCGGCTG CGCAGTTCCT ACAGGTCGGC GGAACTGGAT CGGCGCCCGT ATCTCACCGC CAGCTCGAAG AGCAAGTCGC GGTAG
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Protein sequence | MAQHPPNNRP HDFTGGLSRR EAGDFTTDRR VLLLVGMSII VGTAGAFAAW CLVSLIALVT NVIWFGQIGI QPASLAAVPR SLWVVLVPPL GGLVIGLMAR FGSEKIRGHG IPEAIEAILI GGSRMSPKVA VLKPLSSAIS IGTGGPFGAE GPIIMTGGAI GSLFAQFFHM SAAERKTLLV AGAAAGMTAI FGSPIAAVML AVELLLFEWK PRSFIPVAVA ACVSICWRPL LFGVGPLFPT HFQVALPWWG IFACAAMGII SGLQSGLLTT LLYRIEDLFE ALPIHWMWWP ALGGLVIGLG GLIEPRAMGV GYDIIDGLLN NRLLAPAVMS ILLVKTIIWL FALSSGTSGG VLAPLLIFGG ALGWLVGLVM PGNDPGFWAL LGMAAMMGGT MRAPLTGTFF AMEITGDVST LVPLLAATVV AYAVTVLLLR RSILTEKIAR RGQHITREYG VDPFELSRAS EIMISDVDTL PVAMTMGEAC DFFASQRKTH RIYPVVDATG RLAGVVSRAD ALLWQGNPDL ASQTLAENVT DDSVPVGHPD DTVAFIADLM LSTGDGRIPI VDPTSGKLCG LIARKDLLRL RSSYRSAELD RRPYLTASSK SKSR
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