Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6325 |
Symbol | |
ID | 8016939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | + |
Start bp | 41721 |
End bp | 42485 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644828120 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002979320 |
Protein GI | 241554107 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.251484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTCG ACAGATTTCG CCTGAACGGA CAGGTGGCGC TGGTGACCGG CGGCACGCGC GGCATCGGGC TTGCCATCGC CGAGGCGCTC GGCGAGGCGG GCGCCAAAGT CATCATCACG GGCAGAACCC GCAATCTGGC CGCGGAAGAC CAGCTCTCCA GGGTCGGCGT CGATTGCGAT TTCATCGCCG TCGACCTGAT GAAGGAAAGC GCTGCCGACG AACTCGTCGC TGAGACTCTT TCGCGGGCGG GGCGGCTCGA CATCCTCGTC AACAATGCCG GCATCGCCAT TCACGGCGAC AGCGGCGAAT TCTCCGATGC CATCTGGCGC GAAATCATGA CGGTTAACGT CGACGCCGTC TTTCGCGCCT GCCGCGCCGC ATTAGCACCG ATGCGGCGCC AAGGCGGCGG CGCCATCCTC AATATCGGCT CGATATCGGG CATCGTGTCC AACATTCCCC AGAACCAGGT CGCCTATAAC ACCTCGAAGG CGGCGGTCCA CATGATGACG AAGAGCCTCG CCAGCGAGGT TGCCGCTGAA AACATCCGCG TCAACGCCAT CGCCCCCGGC TATATCGAGA CCGATCTGTC GCGCGGCGGC ATCGACAATC CCGACTGGTT CCCGACCTGG CGCAGCATGA CCCCGATGGG ACGCGTCGGG CAGCCGGAGG AGGTGGCGGG TGCCGCATTG TTCCTCTGCT CGGCGGCAGC AAGTTATGTC ACCGGCGAAG TGCTGGTTAT CGACGGCGGT TATACAACGC GCTGA
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Protein sequence | MIFDRFRLNG QVALVTGGTR GIGLAIAEAL GEAGAKVIIT GRTRNLAAED QLSRVGVDCD FIAVDLMKES AADELVAETL SRAGRLDILV NNAGIAIHGD SGEFSDAIWR EIMTVNVDAV FRACRAALAP MRRQGGGAIL NIGSISGIVS NIPQNQVAYN TSKAAVHMMT KSLASEVAAE NIRVNAIAPG YIETDLSRGG IDNPDWFPTW RSMTPMGRVG QPEEVAGAAL FLCSAAASYV TGEVLVIDGG YTTR
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