Gene Rleg_5948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5948 
Symbol 
ID8016368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp493034 
End bp493990 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content58% 
IMG OID644828061 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_002979261 
Protein GI241518633 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC TGTTTGCGTT TCTGATGCCG GTCGAAAGCT CCACCTACAG CCAGCAGGTC 
GACATCTTCG CTATCGCTTT TTCCGCGCTC ATCCTCGCCA TGGCGGGGCC TGTCTTCATC
CTTATCATCG TCTTTGCCAT TAAGTATCGC CGTGGCAAAC CAGCCAATCG CGTTCATCCG
CCGAAACGAG ATCTTCGGCT GGAATTGTCA TGGTCTATCC TGCCTTCCTT ATGCCTTCTC
GGTTTTTTCG GCTGGTCGAC AGCACTTTTC GCTACACGCT ATTTCCCGCC GGCGAATGCG
CTCGATATCG ACGTCGTCGC CAAGCAGTGG ATGTGGAAAT TTCAGCATCC TGAAGGGCAG
GGTGAGATCA ACGAGCTTCA TGTACCAGTA GACCAGCCGG TCAAGCTTAC CATGGCCTCG
CAAGACGTTA TCCATAGCCT CTTCGTCCCC GCCCTACGTC TGAAGCAGGA TGTGGTTCCG
GGCCGTTATA CGGTGATGTG GTTCACGCCG GACAAGGTCG GGACTTTCCG TCTAACCTGT
GCCGAGTTCT GCGGCACTGA TCATTCCGAA ATGGGCGGCC AGATTATCGT CACCACACAT
GCGCAGTATA GCCGGTGGCT GAGCCGTTTT TCCGTCGACC AAACTTTGGC GGCTGCAGGC
GCGGCGCTCT TTCGCAGTCA CGGCTGTAGC GGCTGTCATG ATCCCTCGGC AAGCGTGCAC
GCACCGAAGC TCGATGGCGT CTACGGTAGC CCGGTGCCCC TCTCAGACGG GACGACCGTG
AAGGCGGATG ATCAGTACAT CCGCGACAGC ATTCTGCTGC CGCAGAAGCA GCTCGCCGCC
GGGTATCCGC CGATCATGCC GACGTTCCAG AACATCCTTT CGGAAGAGGA GGTACTGAAG
CTCGTCGCCT ACATCAAGTC GATTGGAACA GGGGGCGCGG CCGATGCCAC GCAATGA
 
Protein sequence
MADLFAFLMP VESSTYSQQV DIFAIAFSAL ILAMAGPVFI LIIVFAIKYR RGKPANRVHP 
PKRDLRLELS WSILPSLCLL GFFGWSTALF ATRYFPPANA LDIDVVAKQW MWKFQHPEGQ
GEINELHVPV DQPVKLTMAS QDVIHSLFVP ALRLKQDVVP GRYTVMWFTP DKVGTFRLTC
AEFCGTDHSE MGGQIIVTTH AQYSRWLSRF SVDQTLAAAG AALFRSHGCS GCHDPSASVH
APKLDGVYGS PVPLSDGTTV KADDQYIRDS ILLPQKQLAA GYPPIMPTFQ NILSEEEVLK
LVAYIKSIGT GGAADATQ