Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5944 |
Symbol | nhaA |
ID | 8016364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 488221 |
End bp | 489411 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644828057 |
Product | pH-dependent sodium/proton antiporter |
Protein accession | YP_002979257 |
Protein GI | 241518629 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.195827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTGC CGATCGCGAC TGGCCGCATT CAATCCACTC TCCGCAGATT TCTTGACAGC GAGGCCTCCG GCGGCATCGT TTTGATGGCT GCCGCGGCAA TGGCCCTTGC GGTCGCAAAC TCGCCGCTGG CGGGCGCATA TTTCCATGCC CTCCATCTTT ACCTCGGGCC ACTGAGCTTG CAGCACTGGA TCAATGACGC CCTGATGGCC GTGTTCTTCC TGCTCGTCGG TCTGGAGATC AAGCGCGAAA TGCTCGATGG CCAGCTCTCG ACCTGGAGCA GGCGAATTCT TCCCGGTGCC GCCGCGGCCG GAGGAATGCT CGCCCCAGCC CTCGTCTATC TGGCTTTCAA TGCCGGGACG CCAGCTAGCC TCCGCGGTTG GGCGATCCCG ACGGCCACAG ACATTGCCTT CGCGCTCGGA GTGCTGTCGC TCTTTGGCAA CCGGGTTCCG GCGTCCCTGA AAATCTTTCT GGCGGCGCTT GCCATTATCG ACGACCTCGG CGCCGTCCTC GTCATCGCAC TCTTCTATAC AAACGGTCTC AACCTCCTGG CCCTTGCCGG AGCCGCCGCA GTTCTTGCCC TGCTGTTTTT CATGAACCGA GCCGGCGTGA AGACGCTGAC GCTTTATCTC GGCCTTGGCG TCGCCTTGTG GGTGCTGATG TTCACCTCCG GGATCCACGC CACGCTTGCG GGCGTGCTGC TGGCCTTGAC GATACCGATT AAGCTTTCTC CCGGCGCTCC GGAGGCTAGC GACGAAGAAT CTCCGCTGCA CCGGCTCGAA CACCTGCTTC ATCGACCAGT GGCATTCATC ATCGTCCCAC TCTTTGGCTT GGCCAACGCC GGCGTTTCGC TTCGCGGCAC GTCCATCTCG AGTTTGGGAG ACCCTCATAC AATTGGCGTC GCCGCCGGAC TGTTTGCTGG CAAGTTGCTT GGGGTTCTCT CCGTCGTCGG CCTCCTGGTG AAGCTACGTT TTGCGCAGCT TCCAGCAATG GCGAACTGGA CGCAGATGAC CGGTGTCGCG CTTCTTTGCG GCATCGGCTT CACGATGAGT CTCTTTATCG GTCTTCTCGC TTTCGATGAC CCAGCCGTAC AGGACAAGGT CAAGATCGGC ATTCTGCTCG GTTCGGCGAT CTCTGGCGTG GCCGGATCCG CGGTTCTGAT GGCGAGCCGG CGGAAAAGCA GCCGGTCGTA G
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Protein sequence | MSLPIATGRI QSTLRRFLDS EASGGIVLMA AAAMALAVAN SPLAGAYFHA LHLYLGPLSL QHWINDALMA VFFLLVGLEI KREMLDGQLS TWSRRILPGA AAAGGMLAPA LVYLAFNAGT PASLRGWAIP TATDIAFALG VLSLFGNRVP ASLKIFLAAL AIIDDLGAVL VIALFYTNGL NLLALAGAAA VLALLFFMNR AGVKTLTLYL GLGVALWVLM FTSGIHATLA GVLLALTIPI KLSPGAPEAS DEESPLHRLE HLLHRPVAFI IVPLFGLANA GVSLRGTSIS SLGDPHTIGV AAGLFAGKLL GVLSVVGLLV KLRFAQLPAM ANWTQMTGVA LLCGIGFTMS LFIGLLAFDD PAVQDKVKIG ILLGSAISGV AGSAVLMASR RKSSRS
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