Gene Rleg_5696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5696 
Symbol 
ID8016659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp280060 
End bp280911 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content59% 
IMG OID644827849 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002979049 
Protein GI241518421 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.697019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0828938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTT TCAAAACCCG TCGCGGTCGC CGCCTCATGG CCGATATCCT GACCTATGCC 
GTGCTCTTGA CGATGACGAC TTTCTGCCTT GGACCCATCG TCTGGATGTT TTTGACGTCC
CTGAAGAACG AAGCCGACAT CGTGACCTCC CAGATGCAGT ACATTCCCCG CACGATTACG
TTGCAGAACT ACCGCTCAAT CTGGACGCAA TCGAATTTTC CGGTGCTGAT CACAAACAGC
CTGGTGGTGA CGACGATCAC GGTGGCGATC TGCGTCCTGA CTGGAACGCT TGCAGCCTAC
GCATTCTCGC GGCTATCGTT CAGGGGCCGC GACAGACTAA TGCTCAGCTA CCTCCTGGTG
CGGATGTTCC CGGCCGTCAT GGTGATCATT CCGCTCTTTG TGATGATGCG GACCGTTGGC
CTCGTCGACA GCCGCTTCGG CTTGGCGCTT GCCTATACCA GCTTTCTGCT GCCGCTGTTC
GTCTGGATGC TTAAAGGTTT CTTTGACGCG GCCCCGAAAG AGCTTGAAAG CGCCGCCCGT
ATCGATGGGT CCACCAGATT GGGCGCCATG GTGCGCATCG TCTTGCCGCT CGCGCGCAAC
GGTCTTGTCG CCAGCTCGGT GTTTATCGCG ATCGCCGCCT GGAACGAGTT CATTTTCGCG
CTGATGCTGA CGACCGGACA GGGATCGAGG ACCTGGCCGG TCGGTCTGCA ACTGATGGTC
GGCGAGTTTC AACTGCCCTG GGGCGTTCTT GCTGCGGGTG GCATGCTCAG TATTCTGCCA
GTCGTCATTC TGTTTGCGTT CGTCCAGCGC GCGATGGTCC AGGGCCTCAC CGCAGGCGCG
GTCAAGGGTT AG
 
Protein sequence
MTIFKTRRGR RLMADILTYA VLLTMTTFCL GPIVWMFLTS LKNEADIVTS QMQYIPRTIT 
LQNYRSIWTQ SNFPVLITNS LVVTTITVAI CVLTGTLAAY AFSRLSFRGR DRLMLSYLLV
RMFPAVMVII PLFVMMRTVG LVDSRFGLAL AYTSFLLPLF VWMLKGFFDA APKELESAAR
IDGSTRLGAM VRIVLPLARN GLVASSVFIA IAAWNEFIFA LMLTTGQGSR TWPVGLQLMV
GEFQLPWGVL AAGGMLSILP VVILFAFVQR AMVQGLTAGA VKG