Gene Rleg_5652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5652 
Symbol 
ID8016878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand+ 
Start bp231952 
End bp232575 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID644827809 
Productporin 
Protein accessionYP_002979009 
Protein GI241518381 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.303382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.313957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGA TAGCCGCCGC AACGCTACTC GCTCTTGTCT CGACCACCGC GCTTGCGGCC 
GATGCGGTCC CGGTCATTTC GGACGCTCCC GTTGCGGCCG CTCCTGCATT TACCTGGTCC 
GGTCCGTACT TGGGTATCGA TGGCGGCGCG GGATGGCTTA ACGGTGACTT CAGCGCCGGT 
GGTGCCAGCG CTTCCGAGGA TTTTAACGGC GGCATCTTCG GCGGTTTTGT GGGTTACAAC 
TTCCAGTTCG ATAACATTGT TGTTGGCATC GAGGGCAACC TCGAACACAA CTGGAATGAA 
GAGGAAGCGC TGGGAGCTGA CGTTGGGACC GATTGGACCG GCGCTGTTCG TGGTCGTGTC 
GGCTATGCTT TCGACAAGGC GCTGATCTAT GGCGCAGCCG GTTGGACCGC GACGCGCGGT 
TACGTAGACC TGCCTGGCCT TGACAAGGAA ACGGAGACCT TCAACGGCTA CACCGTAGGA 
GCCGGCCTCG ACTTCGCGAT CACCAACAAC ATCTTCGCTC GTGGTGAATA TCGGTACAAC 
GACTTTGGCG AGAAGGACGT TCTCGGCGTT GACGTCGACC TCGATCAGCA CGAACTCAAG 
TTTGGCATTG GCGTAAAGTT CTAA
 
Protein sequence
MKLIAAATLL ALVSTTALAA DAVPVISDAP VAAAPAFTWS GPYLGIDGGA GWLNGDFSAG 
GASASEDFNG GIFGGFVGYN FQFDNIVVGI EGNLEHNWNE EEALGADVGT DWTGAVRGRV 
GYAFDKALIY GAAGWTATRG YVDLPGLDKE TETFNGYTVG AGLDFAITNN IFARGEYRYN 
DFGEKDVLGV DVDLDQHELK FGIGVKF