Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5562 |
Symbol | |
ID | 8016453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | + |
Start bp | 149295 |
End bp | 149822 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644827729 |
Product | hypothetical protein |
Protein accession | YP_002978929 |
Protein GI | 241518301 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.425424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0185018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA TCATTATCGC CTCTCTTGCC ATTTCGCTTG CTGGACCTGT CCTGGCCCAA TCCGCCGCGG AAAAGTCCGG CGTCAACTCG CTGATTGGCG TTGCGCCGAA GACAGAGGAC TTCGTACAGG AGGCCGCCAC CAGCGACATG TTCGAGATCG AATCCAGCAG GTTGGCACTC GATCGCGGTG ATGCCGCGAC CAAAACCTTC GCCCAGCAGA TGGTGACGGA CCACGAGAAG ACGAGCAGCG AGCTCAAGGC GCTGATTTCC GCCGGCAAGG TCAAGGCGCA GTTGCCGAGC GCCATGACCA GCGCGCAGCA GGACATGCTC GACAAGCTGA AGGGCCTTCA AGGCGATGAT TTCATGAAGC AATATCATTC CGACCAGGAA TCCGCGCACG AGGACGCGGT CGACCTCTTC AAGCGCTACG GCGAAGGCGG CGACAATGCT GAGCTGAAAG CTTGGGCGGC AAGCACGAGG CCTGCGCTTG AACATCATCT GCAGATGGCG GAGGACCTGA ACAAATAG
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Protein sequence | MKKIIIASLA ISLAGPVLAQ SAAEKSGVNS LIGVAPKTED FVQEAATSDM FEIESSRLAL DRGDAATKTF AQQMVTDHEK TSSELKALIS AGKVKAQLPS AMTSAQQDML DKLKGLQGDD FMKQYHSDQE SAHEDAVDLF KRYGEGGDNA ELKAWAASTR PALEHHLQMA EDLNK
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