Gene Rleg_5562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5562 
Symbol 
ID8016453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp149295 
End bp149822 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID644827729 
Producthypothetical protein 
Protein accessionYP_002978929 
Protein GI241518301 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.425424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0185018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCATTATCGC CTCTCTTGCC ATTTCGCTTG CTGGACCTGT CCTGGCCCAA 
TCCGCCGCGG AAAAGTCCGG CGTCAACTCG CTGATTGGCG TTGCGCCGAA GACAGAGGAC
TTCGTACAGG AGGCCGCCAC CAGCGACATG TTCGAGATCG AATCCAGCAG GTTGGCACTC
GATCGCGGTG ATGCCGCGAC CAAAACCTTC GCCCAGCAGA TGGTGACGGA CCACGAGAAG
ACGAGCAGCG AGCTCAAGGC GCTGATTTCC GCCGGCAAGG TCAAGGCGCA GTTGCCGAGC
GCCATGACCA GCGCGCAGCA GGACATGCTC GACAAGCTGA AGGGCCTTCA AGGCGATGAT
TTCATGAAGC AATATCATTC CGACCAGGAA TCCGCGCACG AGGACGCGGT CGACCTCTTC
AAGCGCTACG GCGAAGGCGG CGACAATGCT GAGCTGAAAG CTTGGGCGGC AAGCACGAGG
CCTGCGCTTG AACATCATCT GCAGATGGCG GAGGACCTGA ACAAATAG
 
Protein sequence
MKKIIIASLA ISLAGPVLAQ SAAEKSGVNS LIGVAPKTED FVQEAATSDM FEIESSRLAL 
DRGDAATKTF AQQMVTDHEK TSSELKALIS AGKVKAQLPS AMTSAQQDML DKLKGLQGDD
FMKQYHSDQE SAHEDAVDLF KRYGEGGDNA ELKAWAASTR PALEHHLQMA EDLNK