Gene Rleg_5504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5504 
Symbol 
ID8016395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp90531 
End bp91397 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content60% 
IMG OID644827671 
ProductTaurine catabolism dioxygenase TauD/TfdA 
Protein accessionYP_002978871 
Protein GI241518243 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.255533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.425831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCA AAATAAGGCT TCGCGCCGTT CAGCATGCCA GCAATGTCTG CGGCGATATC 
GAGGGTTTCG ACTTCAATGA CTATGACGCC GACGACGTCG CGGCGGTGCG AAAGTTCTGG
CTGCAATACG GCGTCGTCCG TTTCAAGAAG GCCGGCATCA CCGACGCCCA GCAGGTGCAG
TTCTCGCGTC ACTTCGGCGA GTTCGTCATC CATCCCAAGC AATTGCAGGA AGGCGGTCAT
CCGACCCACC CGGAAATCCT CGTCATCAGC AATGCGATGA AGGATGGCAA GCCAAGCGGT
GCGATGGGCA ATAGCGAGGC GACGTGGCAC ACCGATACGT GGTTCTACGA ACGCCCGCCG
GCGGGCGCGA TCCTGCGTGC CGTCGCTGTT CCGCCTTCAG GCGGCGACAC TTATTTCCTC
TCGACCTATA TCGCTTATGA CACGCTGCCG GCTCCTCTAA AGAACGCCGT CGATGGGCGC
CAGATCTTCT TCCAGAACGT CTACGACAAG ACGGGCAAGC TCAGGCTTGG CAAGTCCACG
CCGAAAAGCC AGGACTTCCG CGAATGGAGC GGCATCGTGC ATCCGTTGGT GCGCACACAT
GGTGAGACAG GCCGCAAGGC GCTTTACCTC GGCGGAACGA CTGAAGGCGC GTGGATCGTG
GGCATGAGCC GCGATGAGAG CGACGCGCTG CTCGCCGAAC TGTGGGATCA CACGACGAAC
ACGAAGCACA TCTTCGTGCA GCAATGGGAT GAGGGCGACA TCATGATGTG GGACAATCGT
TGCACCATGC ACCGCCGCGA CTCCTTCGAT CCCGCGTCCA TCCGGATCAT GCATCGCACC
ACCACTTCCG GCGAACGGCC GGTCTGA
 
Protein sequence
MLTKIRLRAV QHASNVCGDI EGFDFNDYDA DDVAAVRKFW LQYGVVRFKK AGITDAQQVQ 
FSRHFGEFVI HPKQLQEGGH PTHPEILVIS NAMKDGKPSG AMGNSEATWH TDTWFYERPP
AGAILRAVAV PPSGGDTYFL STYIAYDTLP APLKNAVDGR QIFFQNVYDK TGKLRLGKST
PKSQDFREWS GIVHPLVRTH GETGRKALYL GGTTEGAWIV GMSRDESDAL LAELWDHTTN
TKHIFVQQWD EGDIMMWDNR CTMHRRDSFD PASIRIMHRT TTSGERPV