Gene Rleg_5500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5500 
Symbol 
ID8016809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp86174 
End bp87535 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content63% 
IMG OID644827667 
ProductMmgE/PrpD family protein 
Protein accessionYP_002978867 
Protein GI241518239 
COG category[R] General function prediction only 
COG ID[COG2079] Uncharacterized protein involved in propionate catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.168199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.788577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC CGACAGATCC CATGTACACC ACGCACCTCC TCGCCGAGCA CGTCCATTCG 
CTCTCCTCAG CTCCGCCCCC GGTCAGCACC CGTGATACCG CCTTGCGTTG CATTCTCGAT
CTTATCGGGG CGGCGGTTGC TGGTGCTGCG CTTCAGTGCA GTCGTGCGGC CCGTAATAGC
GCTACCGCCC TCTTCGGCAA AGGCGAGGCG GCCATTTGGA TGACGGATCG GACCGTGATG
CCCATCGCAG CCGTGATCGC CAACGCGACC GCGGCCTCTG CGCTCGACCT GGACGACGGA
CATCGCGCAG CGCGCGGACA TCCGGGCGCC TGTGTCGTTC CCACCGTCTT GACCTTGGCG
CCGTTTGCCG GCGTCTCAGC CGATGATGTC CTGTCGGCAA TCGTTTCGGG TTATGATGTC
GGCGTCAGAG TGGCCGCGGC CCAAAATGCC GAAGGGATTC AGACCCGGCA GTCGGGACGG
TGGGCCGCAT TGGCCGCGGT TGCGGCAGCG GCGTCACTCT TCAAGGTCGA GCCGGCCTTG
ATCGCGCAGG CGCTTTCGAT CGCCGGCGTG CTTGCCCCCA ATCAACAGGC CAATGGAAGT
TCAGGCTACT CCCGGCTCAC GGGCAATGAC GTCAAGGAAG GGATTCCCTG GAGTGCCGCC
ACCGGTCTTA TGGCGCTCGA CCTCGCCCGC AACGGCTATA CCGGGCCGGA AGATCTCCTC
GATCATCCCG GCTATTACGA CCGGCAGAGG ATACTGGAAG GACTGGGGCA GCGTTTTGAA
ATTTGCGGCA CTTATTTCAA GCCCTATGCC TGTTGCCGCT ATATACACCC GGCGCTCGAT
CGCCTCTTCG ATCTTGTGAA GGCTCACGAA CTGAGGGCCG CGGACATTGT CTCGGTGGAG
GTAGAGACTT TCGGCTGGGC GCTCAAGCTC GGCAACCTGC TTTCGCCCGC GAACCTTGTC
GACATTCAAT ATAGTCTTCC CTATTGCGTC GCCATTGCCG CGATCGAGGG CCGCGGCGCC
CTTGCTCCCG TCAGCGAGAG CCTTCTCAAT CGGCCGGACC TCACTCACCT CGCGCGTCAG
GTGAGGATCA CCGTCAATCT TGAGATCGAC GCGCTCTTTC CCGCCGAGAC TCTGGCGAAG
GTGACTGTCG AGACACGGCG GCACAAATAC GTCTCGGCAC TGGATGGCCC GTCCGGCGAT
CCCCAGCGTC CGATGGACTG GCGGGCGATC GAAGAAAAGT TTTTGCGCGT CACGCGGCAT
GTCCTGTCGC CTTCCAAGCA GGGGGCGATC ATCGATGGCG TCCTCGGCCT CGCGGCTGGA
GAGCTGGACC CACTTCTGCG GCATCTGCGT TCGCCAGGCT AG
 
Protein sequence
MKTPTDPMYT THLLAEHVHS LSSAPPPVST RDTALRCILD LIGAAVAGAA LQCSRAARNS 
ATALFGKGEA AIWMTDRTVM PIAAVIANAT AASALDLDDG HRAARGHPGA CVVPTVLTLA
PFAGVSADDV LSAIVSGYDV GVRVAAAQNA EGIQTRQSGR WAALAAVAAA ASLFKVEPAL
IAQALSIAGV LAPNQQANGS SGYSRLTGND VKEGIPWSAA TGLMALDLAR NGYTGPEDLL
DHPGYYDRQR ILEGLGQRFE ICGTYFKPYA CCRYIHPALD RLFDLVKAHE LRAADIVSVE
VETFGWALKL GNLLSPANLV DIQYSLPYCV AIAAIEGRGA LAPVSESLLN RPDLTHLARQ
VRITVNLEID ALFPAETLAK VTVETRRHKY VSALDGPSGD PQRPMDWRAI EEKFLRVTRH
VLSPSKQGAI IDGVLGLAAG ELDPLLRHLR SPG