Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5481 |
Symbol | |
ID | 8016790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | + |
Start bp | 67795 |
End bp | 68421 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644827649 |
Product | putative autoinducer synthesis protein |
Protein accession | YP_002978849 |
Protein GI | 241518221 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTGA TAGCACTCAA GACGACAAAA TCGCGCAAGG ACGCAGCACT TCTCGATCAA ATGTACCGGC TGCGGTCGCG TGTTTTCGCC GACCGTCTCG CCTGGAACGT GTCCAGGTCC AACGGGCGGG AGCGCGATCA ATTCGACGAA TTCGGGCCGA CCTATATTCT TGCCCTATCG GATGGCGATG TGGTGATCGG CTGCGCACGG CTGCTGCCGG CCATCGGTCC TACCATGCTG CAGCAGGTCT TCCCGCAGCT TCTTTCGGCA GGACGGCTCG ACGCCGATCC GGCCATGATC GAAAGCTCTC GTTTTTGCGT CGATACCGCG GGTTCCCGTG GGGCCGGGGA AGGGGGCCTG AGCGACGTCA CGTTCGGCAT GTTCGCAGGC ATCCTCGAAT GGTGCCTCCA TCACGGTTAC CGCGAAATCG CAACAGCCAC CGATGTTCGC TTCGAGCGAA TCTTGCGGCG CGCCGGCTGG CCGATGCAGC GCCTTGGTCA GCCGATCATG ATCAACGAGA CGCTGAGCGT GGCCGGCATC CTGCCGGTCA AGTGGGAGAA CTTCGAACGG GTCCGACCGC ACGCCTACCG CTCCGCATTC GGTGCGCGGC GCCAGCATGC GGCATAA
|
Protein sequence | MKLIALKTTK SRKDAALLDQ MYRLRSRVFA DRLAWNVSRS NGRERDQFDE FGPTYILALS DGDVVIGCAR LLPAIGPTML QQVFPQLLSA GRLDADPAMI ESSRFCVDTA GSRGAGEGGL SDVTFGMFAG ILEWCLHHGY REIATATDVR FERILRRAGW PMQRLGQPIM INETLSVAGI LPVKWENFER VRPHAYRSAF GARRQHAA
|
| |