| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6257 |
|---|
| Symbol | |
|---|
| ID | 8016128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012852 |
|---|
| Strand | - |
|---|
| Start bp | 322306 |
|---|
| End bp | 323028 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644827560 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
|---|
| Protein accession | YP_002978760 |
|---|
| Protein GI | 241258876 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.766914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATA GCCGCGTCGA TTGCCCCGGT ATGCCGGACC GCCAAGCCTT GGAAAATATT
GATCTCGTGA TCTTCGATTG CGACGGCGTG CTGATCGATA GCGAGCCGAT CGCCAGCCGC
ACCTTGGCGG AAACTCTGCA AGGTGCCGGC ATTGCGATCA CCGCCGCAGA GGCTCATCTC
AAATTTACCG GCAATTCAGA AAGCATCATC GGCGAGATGT GTCGGCGCGA TTACGGGATT
GTCGAAATCC CCGAGCTGTT TGAAACATGG CACCAGCGTC TATTCGAAGA GTTTTCACGC
TCGCTGCTGC CGATCCCCGG CATTGCCGAT GTCGTCTACG GACTTCAGCG ACCAAAATGC
GTTGCGTCAA ACAGCACGAT GCAGCGGCTC CGCAACAGCT TGGGCATATT GGATCTGTGG
AGCGCATTTG GAGACGAGGT CTTCAGTGCC GAAGCCGTCG CCCGGCCGAA GCCCGCGCCC
GATCTCTTGC TGCACTGCGC GGAGCGTTTT CGAGCCCGTC CCTCCAGATG CGTCATGATC
GACGATAGCA GTCATGGCGT GGCGGCAGCC GTTTCCGCAG GAATGACGGC CGTCGGATTT
GTCGACCCGG CCGATCCGAG ACCTGACCGG CATACGGCAT TGGTGACAGC CGGTGCATTT
GCCGTTGCCA TGGGGGCGGA GCAGCTTGTC GCCATCCTGG AGGATATCGG AGGCACGCTG
TGA
|
|---|
| Protein sequence | MLDSRVDCPG MPDRQALENI DLVIFDCDGV LIDSEPIASR TLAETLQGAG IAITAAEAHL
KFTGNSESII GEMCRRDYGI VEIPELFETW HQRLFEEFSR SLLPIPGIAD VVYGLQRPKC
VASNSTMQRL RNSLGILDLW SAFGDEVFSA EAVARPKPAP DLLLHCAERF RARPSRCVMI
DDSSHGVAAA VSAGMTAVGF VDPADPRPDR HTALVTAGAF AVAMGAEQLV AILEDIGGTL
|
|---|
| |