Gene Rleg_6250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6250 
Symbol 
ID8016121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp313987 
End bp314994 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content56% 
IMG OID644827553 
Productinner-membrane translocator 
Protein accessionYP_002978753 
Protein GI241258869 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.862039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.813312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCG ACCAGACTGC AAAGTCGGAA TCGGCGACCG AAGGAACAAG ATCTCGTTTC 
TCGTTGTCGC AACATATGAA CGAACTCAGT TTGTTCGTTG CGATCGTAAT ACTCTACGTC
GTTTTTACAG CCACCGCGAA CGGTTTCCTT TCGTTCAATA ACCAGATCAA TATCCTCCGA
GACGCGGCTA CGATCGGGAT CGCTGCGTGG GCGGCTACGC TCATTATCAT TGCAGGTGAA
ATCGACGTCA GCGTCGGTCC GATGGTGGCG TTCATTTCAG TCGTGCTTGC GTTTCTGCTT
CAGTGGGGCG TTCCGACTCC GATCGCCTTC GCGCTTGCGA TTTTGGTCGG TGCTATGCTT
GGTTCGATCG CCGGAGCTCT GCGAGCATAC TTCGATGTCC CGTCCTTCGT TGGCACGCTC
GGTCTGTGGA GTGCTCTTCG CGGGACTGCA TTGTTCGTGA CCGATGCGCT GCCCGTTTCT
ATCGGTCGCA ACGATACCCT GGACGCCCTT GATCGTTCGT TTCTTGGCAT TCCGCCTGCC
GCAATCATCA TGCTGATCTT GTTTGCGGTG TTCACCTTCA TCAGCCGAAA GACACCTTTC
GGCAGGTCCG TTTTCGCAAT CGGCGGTAAT GCTCACGCAG CGTTTCTGAG CGGCATCAGT
GTTTCCAAGA TACGCGTCGC GCTGTTTGCG ATCGCCGGTG CAATGGCGGC AATTTCCGGT
ATTCTCCTGC TCTCACGACT AGGATCGGGC AACGCGACCG CAGCGACCGG CCTCGAGTTC
GACGTTATCG CAGCAGTCGT GGTCGGAGGA ACTTCGCTGT CTGGCGGGCG GGGCTCGATG
CTTGGCACGC TTCTGGGCGT GCTCGTTATC ACCCTCATCG GTAACGGCCT TGTCCTGCTT
GGCATCAATC CTTTCTTCCA GCAGGTTGTG CGCGGTCTGA TCATCGTCAT CGCGGTGCTC
GCCAACATCC AGGCGATCAA GCGCAGCATG TCCCGTAACA AGAGCTGA
 
Protein sequence
MSLDQTAKSE SATEGTRSRF SLSQHMNELS LFVAIVILYV VFTATANGFL SFNNQINILR 
DAATIGIAAW AATLIIIAGE IDVSVGPMVA FISVVLAFLL QWGVPTPIAF ALAILVGAML
GSIAGALRAY FDVPSFVGTL GLWSALRGTA LFVTDALPVS IGRNDTLDAL DRSFLGIPPA
AIIMLILFAV FTFISRKTPF GRSVFAIGGN AHAAFLSGIS VSKIRVALFA IAGAMAAISG
ILLLSRLGSG NATAATGLEF DVIAAVVVGG TSLSGGRGSM LGTLLGVLVI TLIGNGLVLL
GINPFFQQVV RGLIIVIAVL ANIQAIKRSM SRNKS