Gene Rleg_6088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6088 
Symbol 
ID8016045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp122458 
End bp124023 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content61% 
IMG OID644827394 
ProductABC transporter related 
Protein accessionYP_002978594 
Protein GI241258710 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC AGAGCACCGA AGGGAGCCGC AATCGGCGGC TCCAGATCGC CAATGTCAGC 
AAAGCATTTG CCGGCGTGAC GGTACTGAAG AACGTGTCGC TTTCTGCCGA TGCGGGCGAG
ATCGTGGCGC TTCTTGGCGC CAATGGCGCG GGTAAGTCTA CGCTCATGAA AATCCTCTCC
GGTGTCTACA CGCTGGACAC CGGACAGATT AGAATTGACG ACACGGCCAG GAATATCTCC
ACGCCTCGGG ATGCCGTTGC GGCCGGCATC CGGCTGATGC CGCAGGAGCT TTCCGTACAT
CCGGACCTTT CGGTCGCCGA AAACATCGCG CTTGGCTCCA TGCCGAAGCG CCGCTTTTTG
GGTATTCCGA TGATCGATCA GGTGGCCGTC GACGCACAGG CGCGGGCGCT CCTGAAGCGA
TTGCGGCTCG ACCATATCGA GCCCGGCCGG CGCATGGGCT CGCTGCCATT GTCCGAACAG
CGCATTGTCG AAATCGCCCG CGCGCTGGCC GGCGAGGCGC GGATCCTGAT CATGGACGAG
CCGACGGCGT CGCTGAGTGA GGCAGATGCC GACAATCTGT TCGAGGTCAT CGAGGCCCTG
AAAGCCCAAG GCGTCACCAT CATCTATATT TCGCATTATC TTGACGAGGT CTTCCGGCTA
AGCGACCGTA TCGTTGTCTT GCGTGACGGC GAGGTCCGAG GTCAGTTCGA AACCCGCGAC
ACCAATCGCG ACGAAGTTCT GACGGCGATG CTCGGCAGCG AACTCGGCGA CCTCTACCCC
GTAAAATCGA AAGTGCTTCA GGACGCAAAG ACCGTCCTGT CCGTCGATGG ACTGTCACTT
CCCGGATGGC TCGACGGCGT GGCATTGACC GTGCGACGCG GCGAGGTTTT CGGCGTCTTC
GGCCTTATCG GCTCCGGCGC CGAGAAAATA GGCCGGGCAA TCTATGGCGC CGAGCCTGCC
GCCCATGCCG AGGCCATTCT GCTGAACGAT GTGGACATTG GTCTCTCTGG GCCGCGAAAG
AGAGTGCATA GCGGCATCGG GTTCGTGGCC GCAGAGCGAA AGCGCCAGGG CCTGATTGGC
AATTTGTCGG TGCGAACCAA CACGACACTG CCCTATCTCA GCCTGTTCAC GCAATCCGGC
GTTGTCGACC AAAAGCGGGA AGACGACAGC ACCCGTGAAT GGATCAAAAC CCTGCGGGTC
AATACCTCAG GTCCGGACCA AGAGATCCGC CTTCTGTCCG GCGGCAATCA GCAGAAGATC
TGCCTTGCGC GTTGGCTGCT CGGAAACCCG AATGTTCTGA TCCTCGAAGA GCCGACACGC
GGGGTCGATC TTGGTGCCCG GCGCGAGATC TACATGGAAA TCCGTCGGCT GGCGGAGGCG
GGGCTGGCGA TCCTGATCGT CTCCTCGGAT GCGGAAGAGG TGGCGGGGCT CGCAGATCGC
AGCCTCGTAC TCGAGGATGG CAAGGTCGTC GCCGAGCTTG GGCAGGACGC AACAGCGACG
GATCTGATGC AGGCAGCCGA GCCACGGGCA GCCCTCCGCG ATAGGAATGA ACTGGAGAAA
ACATGA
 
Protein sequence
MTVQSTEGSR NRRLQIANVS KAFAGVTVLK NVSLSADAGE IVALLGANGA GKSTLMKILS 
GVYTLDTGQI RIDDTARNIS TPRDAVAAGI RLMPQELSVH PDLSVAENIA LGSMPKRRFL
GIPMIDQVAV DAQARALLKR LRLDHIEPGR RMGSLPLSEQ RIVEIARALA GEARILIMDE
PTASLSEADA DNLFEVIEAL KAQGVTIIYI SHYLDEVFRL SDRIVVLRDG EVRGQFETRD
TNRDEVLTAM LGSELGDLYP VKSKVLQDAK TVLSVDGLSL PGWLDGVALT VRRGEVFGVF
GLIGSGAEKI GRAIYGAEPA AHAEAILLND VDIGLSGPRK RVHSGIGFVA AERKRQGLIG
NLSVRTNTTL PYLSLFTQSG VVDQKREDDS TREWIKTLRV NTSGPDQEIR LLSGGNQQKI
CLARWLLGNP NVLILEEPTR GVDLGARREI YMEIRRLAEA GLAILIVSSD AEEVAGLADR
SLVLEDGKVV AELGQDATAT DLMQAAEPRA ALRDRNELEK T