Gene Rleg_5979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5979 
Symbol 
ID8016337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp8488 
End bp9399 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content57% 
IMG OID644827291 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978491 
Protein GI241258607 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT CCAACGAAAC GACAGCGAGC CGAAAAATCT CTGGCGCTAC CAGTGTCGCA 
AGCGGTCTCT CCTCCGATGA AGTCAGCCGT CTGATGCGCC GGCGCGGCGA GGAATCGCGC
TGGTGGTGGG TGGTTCCGAC GATCTATATC ATTGTGCTCC TGCTGCCGAT CTATTGGCTT
GTTAATATGA GCTTCAAGAC CAACGCGGAA ATCGTCAATT CTCTGACGCT TTATCCTCAT
AACCCGACGA TCGCCAATTA CGTGACGATC TTCACGGAGA AGGCCTGGTA TTCCGGCTAC
ATCAATTCAA TCACCTATGT CGTGATTAAC ATGGTGATCT CGGTGGCAGC CGCGCTGCCG
GCGGCCTATG CCTTCTCCCG TTATCGGTTC CTTGGTGACA AGCATCTTTT CTTCTGGTTG
CTGACGAACC GGATGGCGCC GCCGGCGGTC TTTGCCCTGC CGTTCTTCCA GCTCTACTCA
GCCTTTGGAC TGATCGATAC GCACATCGCG GTGGCATTGG CGCATTGCCT CTTCAACGTG
CCGCTTGCGG TCTGGATCCT TGAAGGCTTC ATGTCCGGCG TGCCGAAGGA AATCGACGAA
ACGGCCTATA TCGATGGCTA TTCGTTCCCG CGCTTTTTCC TGAAGATCTT CACGCCGCTG
ATTGCGAGCG GCATTGGTGT CGCCTGCTTC TTCTGCTTCA TGTTCTCTTG GGTCGAGTTG
CTGATCGCAC GAACGCTGAC GACGACCGAC GCGAAGCCGA TCGCTGCCAC CATGACCCGT
ACCGTCTCTG CATCCGGCAT GGATTGGGGC TTGCTCGCCG CCGCCGGTGT TCTGACCTTG
ATCCCAGGGG CGCTTGTGAT CTGGTTTGTG CGCAATTACA TCGCCAAGGG CTTCGCCCTG
GGGAGGGTTT GA
 
Protein sequence
MSASNETTAS RKISGATSVA SGLSSDEVSR LMRRRGEESR WWWVVPTIYI IVLLLPIYWL 
VNMSFKTNAE IVNSLTLYPH NPTIANYVTI FTEKAWYSGY INSITYVVIN MVISVAAALP
AAYAFSRYRF LGDKHLFFWL LTNRMAPPAV FALPFFQLYS AFGLIDTHIA VALAHCLFNV
PLAVWILEGF MSGVPKEIDE TAYIDGYSFP RFFLKIFTPL IASGIGVACF FCFMFSWVEL
LIARTLTTTD AKPIAATMTR TVSASGMDWG LLAAAGVLTL IPGALVIWFV RNYIAKGFAL
GRV