Gene Rleg_5973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5973 
Symbol 
ID8016331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp1161 
End bp2711 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content63% 
IMG OID644827285 
ProductABC transporter related 
Protein accessionYP_002978485 
Protein GI241258601 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.7217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCA TTTCGTTGAA GCCGCCGGTG ACGGCACGCG ACGACATCAT CCGCTTTGAA 
GGCATCGTCA AGCATTTCGG CGGTGCGCAG GCGCTTGCCG GTGCGTCGCT GATCGTCAGG
CGCGGCACCA TCCACGGTCT CGTCGGCCAG AACGGCGCCG GCAAGTCGAC GCTGATCAAA
CTGCTGGCCG GTCTTCATCA GCCGGATGGC GGCCGGATCG AGATCGAAGG GCAAACATTC
GACAGGCTGA CACCGCATCT TGCCGAAGAG CTCGGTATCC ATTTCATTCA CCAGGACCGG
CTGTTGGTGC CGACCTTCAC CGTCGGCGAA GCTCTGTTCC TTGGCCGGGA ACCGCGGATA
TCGGGCACAC CGTTCCTCGA CCGGCGACTG ATGCAACGTC GCGCGTCTGA TATTCTCAAC
GACTATTTCG GTATCCGGTT GCCGAACGCC GCCTTGATCA GCGAATTGTC GACTGCCGAA
AAGCAGATCG TGCAAATCAC CCGCGCGCTC CTCAATCAGC CGAAGGTGCT CGTCTTCGAT
GAGCCGACGG CCGCACTGGT GCGCCGCGAG GCCGATATCC TCTTCCGGTT GATCCGCCGT
CTGCGCGACG AAGGCGTCAC CATCATCTAT ATCTCGCATT ACCTGAACGA AATCGAAGAG
CTCTGCGACC ACGTCACCGT GCTGCGCAAT GGGCTGGACG TCGCCTCCCT GCCGATCGGG
GAGACCTCGG CTGGCGCGAT TGCGCGGCTG ATGGTCGAAC GCGACATCAA GGAGATGTTT
CCGAAGCCGC AGGTGACGCC CGGCGCGGAA ATCCTCAAGG TCGAGCAGCT GTCGGCGCCG
GGGAAATATA ACGACATCAG TTTCACGCTT CGCCGCGGCG AGGTGCTCGG CCTCACCGGC
CTGCTCGGCT CCGGCGCAAA GGAGCTGGTC CGCACTCTCT TCGGTCTGGA GACCCCGGCT
TCCGGCCATA TCGAAATCAG CGGCAAGGCT GCCCGTTTCA CCAATCCCAC CCAGGCGGCC
GGTCGCGAGA TCGCCCTGGT GCCGGAAGAT CGGCGTCGCC ACGGCGTCGC GCTCGACCTC
AGCGTCGCGG AAAATATCAG CCTTTCCAGC CTTGGCCGCT TCACGCGCTT CGGCTTTCTC
GATCGCAGAC GCGAACAGCA AGAAGTGGAC ACTCTGATTA CGCGGCTGCA AGTGAAGACC
AATGGGCGGG ATGCCCTGCT GCGCACGCTT TCGGGCGGCA ACCAGCAGAA GGTGGCCATC
GCCAAGTGGC TGAGCCGCCG CTCCGAGGTC TATCTCCTCG ACGAACCAAC AGTCGGCGTC
GATATCGGCT CCAAGGTCGA GATCTATACG CTGATCGGCG AACTCGCGTC GCGCGGCGCC
GGCGTCATCG TGCTGTCTTC GGATCTGCCC GAGCTCATCG GCATCACCGA TCGCATCCTG
GTGCTCTTCC GCGGCCGCGT GGTGCGGGAA TTCGTCTCGT CGGAGACCAC GGCGGATGCG
GTGCTCGCTC AATCGACCGG ATCATCCGAG GGACAACGCC ATGTCGGCTG A
 
Protein sequence
MTAISLKPPV TARDDIIRFE GIVKHFGGAQ ALAGASLIVR RGTIHGLVGQ NGAGKSTLIK 
LLAGLHQPDG GRIEIEGQTF DRLTPHLAEE LGIHFIHQDR LLVPTFTVGE ALFLGREPRI
SGTPFLDRRL MQRRASDILN DYFGIRLPNA ALISELSTAE KQIVQITRAL LNQPKVLVFD
EPTAALVRRE ADILFRLIRR LRDEGVTIIY ISHYLNEIEE LCDHVTVLRN GLDVASLPIG
ETSAGAIARL MVERDIKEMF PKPQVTPGAE ILKVEQLSAP GKYNDISFTL RRGEVLGLTG
LLGSGAKELV RTLFGLETPA SGHIEISGKA ARFTNPTQAA GREIALVPED RRRHGVALDL
SVAENISLSS LGRFTRFGFL DRRREQQEVD TLITRLQVKT NGRDALLRTL SGGNQQKVAI
AKWLSRRSEV YLLDEPTVGV DIGSKVEIYT LIGELASRGA GVIVLSSDLP ELIGITDRIL
VLFRGRVVRE FVSSETTADA VLAQSTGSSE GQRHVG