Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5973 |
Symbol | |
ID | 8016331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | + |
Start bp | 1161 |
End bp | 2711 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644827285 |
Product | ABC transporter related |
Protein accession | YP_002978485 |
Protein GI | 241258601 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.7217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCA TTTCGTTGAA GCCGCCGGTG ACGGCACGCG ACGACATCAT CCGCTTTGAA GGCATCGTCA AGCATTTCGG CGGTGCGCAG GCGCTTGCCG GTGCGTCGCT GATCGTCAGG CGCGGCACCA TCCACGGTCT CGTCGGCCAG AACGGCGCCG GCAAGTCGAC GCTGATCAAA CTGCTGGCCG GTCTTCATCA GCCGGATGGC GGCCGGATCG AGATCGAAGG GCAAACATTC GACAGGCTGA CACCGCATCT TGCCGAAGAG CTCGGTATCC ATTTCATTCA CCAGGACCGG CTGTTGGTGC CGACCTTCAC CGTCGGCGAA GCTCTGTTCC TTGGCCGGGA ACCGCGGATA TCGGGCACAC CGTTCCTCGA CCGGCGACTG ATGCAACGTC GCGCGTCTGA TATTCTCAAC GACTATTTCG GTATCCGGTT GCCGAACGCC GCCTTGATCA GCGAATTGTC GACTGCCGAA AAGCAGATCG TGCAAATCAC CCGCGCGCTC CTCAATCAGC CGAAGGTGCT CGTCTTCGAT GAGCCGACGG CCGCACTGGT GCGCCGCGAG GCCGATATCC TCTTCCGGTT GATCCGCCGT CTGCGCGACG AAGGCGTCAC CATCATCTAT ATCTCGCATT ACCTGAACGA AATCGAAGAG CTCTGCGACC ACGTCACCGT GCTGCGCAAT GGGCTGGACG TCGCCTCCCT GCCGATCGGG GAGACCTCGG CTGGCGCGAT TGCGCGGCTG ATGGTCGAAC GCGACATCAA GGAGATGTTT CCGAAGCCGC AGGTGACGCC CGGCGCGGAA ATCCTCAAGG TCGAGCAGCT GTCGGCGCCG GGGAAATATA ACGACATCAG TTTCACGCTT CGCCGCGGCG AGGTGCTCGG CCTCACCGGC CTGCTCGGCT CCGGCGCAAA GGAGCTGGTC CGCACTCTCT TCGGTCTGGA GACCCCGGCT TCCGGCCATA TCGAAATCAG CGGCAAGGCT GCCCGTTTCA CCAATCCCAC CCAGGCGGCC GGTCGCGAGA TCGCCCTGGT GCCGGAAGAT CGGCGTCGCC ACGGCGTCGC GCTCGACCTC AGCGTCGCGG AAAATATCAG CCTTTCCAGC CTTGGCCGCT TCACGCGCTT CGGCTTTCTC GATCGCAGAC GCGAACAGCA AGAAGTGGAC ACTCTGATTA CGCGGCTGCA AGTGAAGACC AATGGGCGGG ATGCCCTGCT GCGCACGCTT TCGGGCGGCA ACCAGCAGAA GGTGGCCATC GCCAAGTGGC TGAGCCGCCG CTCCGAGGTC TATCTCCTCG ACGAACCAAC AGTCGGCGTC GATATCGGCT CCAAGGTCGA GATCTATACG CTGATCGGCG AACTCGCGTC GCGCGGCGCC GGCGTCATCG TGCTGTCTTC GGATCTGCCC GAGCTCATCG GCATCACCGA TCGCATCCTG GTGCTCTTCC GCGGCCGCGT GGTGCGGGAA TTCGTCTCGT CGGAGACCAC GGCGGATGCG GTGCTCGCTC AATCGACCGG ATCATCCGAG GGACAACGCC ATGTCGGCTG A
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Protein sequence | MTAISLKPPV TARDDIIRFE GIVKHFGGAQ ALAGASLIVR RGTIHGLVGQ NGAGKSTLIK LLAGLHQPDG GRIEIEGQTF DRLTPHLAEE LGIHFIHQDR LLVPTFTVGE ALFLGREPRI SGTPFLDRRL MQRRASDILN DYFGIRLPNA ALISELSTAE KQIVQITRAL LNQPKVLVFD EPTAALVRRE ADILFRLIRR LRDEGVTIIY ISHYLNEIEE LCDHVTVLRN GLDVASLPIG ETSAGAIARL MVERDIKEMF PKPQVTPGAE ILKVEQLSAP GKYNDISFTL RRGEVLGLTG LLGSGAKELV RTLFGLETPA SGHIEISGKA ARFTNPTQAA GREIALVPED RRRHGVALDL SVAENISLSS LGRFTRFGFL DRRREQQEVD TLITRLQVKT NGRDALLRTL SGGNQQKVAI AKWLSRRSEV YLLDEPTVGV DIGSKVEIYT LIGELASRGA GVIVLSSDLP ELIGITDRIL VLFRGRVVRE FVSSETTADA VLAQSTGSSE GQRHVG
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