| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5439 |
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| Symbol | |
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| ID | 8016011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012851 |
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| Strand | - |
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| Start bp | 42911 |
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| End bp | 43348 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644827270 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002978470 |
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| Protein GI | 241258204 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCC TCGGCCCGAT TCTGCTACTG GTTCTGTCTC TGTCGTCTCC AACTGCCCAC
GCAGATTGCC TGGACGACGC AGCGGCGTAC CACCGCGTCG ATGGCGCGCT CCTGCGCAGC
ATCGCGCTGC ATGAATCGCA CATGAATCCT CTGGCCATCA ATCGAAATCG TGATGGCTCG
CAGGACCTGG GCCTTATGCA AATCAATTCC GCGCATCTGC CACGGTTGGC CCGCTATGGC
ATCACGCGGC AGCAGCTGCT CGACGCTTGC ATTAACGCGT ATGTGGGCGC TTGGATCTTG
CACGCCAACA TCGACCGGTT TGGCGCGACA TGGCGCGCGG TTGGCGCCTA CAACGCGACG
ACACCCGCCA AGCAGCTCAG ATATGCCAAT CAGATCTACA CGCGGTGGCA ATCGCTGCAG
CGCGCGGCAT TGCCTTGA
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| Protein sequence | MKRLGPILLL VLSLSSPTAH ADCLDDAAAY HRVDGALLRS IALHESHMNP LAINRNRDGS
QDLGLMQINS AHLPRLARYG ITRQQLLDAC INAYVGAWIL HANIDRFGAT WRAVGAYNAT
TPAKQLRYAN QIYTRWQSLQ RAALP
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