| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4534 |
|---|
| Symbol | rplT |
|---|
| ID | 8015291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 4662091 |
|---|
| End bp | 4662495 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644827111 |
|---|
| Product | 50S ribosomal protein L20 |
|---|
| Protein accession | YP_002978311 |
|---|
| Protein GI | 241207215 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.190026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTG TAAAAAGAGG CGTCACCTCT CACGCCAAGC ACAAGAAGGT TCTGAAGGCC
GCAAAGGGCT TTTACGGCCG CCGCAAGAAC ACCATCCGTA CCGCCAAGGC TGCAGTCGAT
CGTTCGAAGC AGTACGCCTA CCGCGACCGC AAGGTCAACA AGCGCAACTT CCGTGCGCTT
TGGATCCAGC GTATCAACGC CGCTGTGCGT GAATTCGGCC TGACCTACGG CCGCTTCATC
GACGGCCTGA ACAAGGCTGG CATCGAAGTC GACCGCAAGG TTCTCTCCGA CATGGCGATC
CACGAGCCGG AAGCATTCGG CGCGCTGGTC AGCGCTGCCA AGAAGGCTCT TGAATACCTC
AAGGAAGCCG GCACGACGAA CGAGTTTGAA GGCGCGGTCA AGTAA
|
|---|
| Protein sequence | MARVKRGVTS HAKHKKVLKA AKGFYGRRKN TIRTAKAAVD RSKQYAYRDR KVNKRNFRAL
WIQRINAAVR EFGLTYGRFI DGLNKAGIEV DRKVLSDMAI HEPEAFGALV SAAKKALEYL
KEAGTTNEFE GAVK
|
|---|
| |