Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4525 |
Symbol | |
ID | 8015284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 4654732 |
End bp | 4655757 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644827102 |
Product | histone deacetylase superfamily |
Protein accession | YP_002978302 |
Protein GI | 241207206 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0601361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTCA TCTATTCCGA AGATCACAAG CTGCGCGATG CCAGGACCGA GCTGCACGCC GGCCAACTGG TGACGCCCTT CGAGGCGCCG TTCCGCGCCG AATGGATTCT TGCGGCGGTC AAGCAGGCGG GCTTCACCGA CGTCGTGGCG CCCGATCCGC ACGGACTGGA AACGGCTCGA AAAGTACATG ATCCCGCCTA TCTGGATTTT CTCGCCACCG TATGGGACCG CTGGGTGGCG GCTGGTTTCA CCGGCGAGGC GATCGCCAAT TCCTTTGCCG TTCGCCGCAC CAGCCAGCGT GTACCCGACA ATATCGTCGG CGCGATCGGC CACTACGCCA ATGCCGCCGA TACCTCGATC ACCAAGGGCT CCTACGAGGC GGCGATCGCT TCCATGCGCT GTGCTATATC AGGCGCCGAC TGGCTGACGC AGGGCAATCG CTTCGCCTTC GCGCTCTGCC GCCCGCCCGG GCACCATGCC GGCATCGATC TCTTCGGCGG CTATTGCTTC ATCAACAATT CGGGCGTCGC GGCACAGCGG CTGCTCGATA GCGGTGCGAG GAAAGTCGCG GTGCTGGATG TCGATTTCCA CCATGGCAAC GGCACCCAGG ATATCTTCTA TCGCCGCGGC GATGTCTTCA CCGCCTCGCT GCATGGTGAT CCCATGCATG CCTTTCCCTA TTTCCTCGGC CATGCCGACG AGGAAGGCGA GGGCGAGGGC GAAGGTAGCA ACCGCAACTA TCCGATGCCG CCGGGCACGC CTTGGGATGT CTGGTCTTCG GCCCTTGCCG ATGCGCTCAC CCGCATCAAG ACATTCGGCG CCGAGGCGGT CGTCGTGGCG CTCGGCGTCG ATACCTTCGA GCGCGATCCG ATCTCCTTCT TCAGCCTCAC CTCGGACGAT TTCACCCGCA TGGGCGCGAT GATATCAGCC ACCGGCTTGC CGGTGCTCGC CTGCATGGAG GGCGGTTACG GCGTGCCGGA GATCGGCCTT AACGTCGCCA ACGTCCTCAA GGGTCTGGAA GCCTGA
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Protein sequence | MRVIYSEDHK LRDARTELHA GQLVTPFEAP FRAEWILAAV KQAGFTDVVA PDPHGLETAR KVHDPAYLDF LATVWDRWVA AGFTGEAIAN SFAVRRTSQR VPDNIVGAIG HYANAADTSI TKGSYEAAIA SMRCAISGAD WLTQGNRFAF ALCRPPGHHA GIDLFGGYCF INNSGVAAQR LLDSGARKVA VLDVDFHHGN GTQDIFYRRG DVFTASLHGD PMHAFPYFLG HADEEGEGEG EGSNRNYPMP PGTPWDVWSS ALADALTRIK TFGAEAVVVA LGVDTFERDP ISFFSLTSDD FTRMGAMISA TGLPVLACME GGYGVPEIGL NVANVLKGLE A
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