| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4142 |
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| Symbol | rpoH2 |
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| ID | 8014936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 4227594 |
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| End bp | 4228457 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644826712 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_002977922 |
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| Protein GI | 241206826 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000322567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.133894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACA TGTCTGCAGA TCGGCGCATG ATCAAAATCG CGATGGCCGC GCCTTATCTC
GCCCGTCAGG AAGAGCACGA TCTCGCCACC CGCTGGAAGG ATCATGACGA CCGCGGCGCG
CGCAACCAGA TTGCCATGGC CCATATGCGC CTCGTCATAT CCATGGCCGG CAAGTTCCGC
AATTTCGGTC TGCCGATGAG CGATCTGGTC CAGGAGGGCT ATGTCGGTCT GCTCGAGGCC
GCCGCCCGCT TCGAGCCGGA ACGCGACGTG CGCTTTTCCA CCTATGCAAG TTGGTGGATC
AGGGCATCTA TCCAGGATTA TATCCTGCGC AACTGGTCGA TCGTGCGCGG CGGTACGAGT
TCGGCGCAAA AAGCGCTGTT CTTCAATCTG CGCCGTCTGC GCGCCAAGCT CGCCAAGGGA
GACACGCAGC TGACGCTGCA ATCCATTCAC CAGGAAATCG CCGCGGCCCT CGGCGTCAGC
CTCTCGGATG TACAGACGAT GGATGCTAGG CTTTCCGGCA ACGACGCCTC GCTGCAGGCG
CCTTCGGTCT CCGGCGATGC CGAGAGCGCG GAAAAGATGG ACTTCCTCGT CAGCGACGAT
CCCCTGCCGG ACGAGCAGGT GTCCAACATG ATCGACGGCG AGCGCCGCCG CGTCTGGCTC
GCCTCGGCGC TGAAACATCT CAACGAACGC GAGATGAAGA TCATCAGCGC CCGGCGTCTG
GCGGAAGACG GTGCCACGCT CGAAGAGCTC GGTGCCGATC TCGGTATTTC CAAGGAGCGC
GTGCGTCAGA TCGAAAGCCG AGCGATGGAG AAGCTTCGCA GCGCGCTCGT CAGCGCCGAT
CCGCATATGG CGGCCTACGC CTGA
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| Protein sequence | MKNMSADRRM IKIAMAAPYL ARQEEHDLAT RWKDHDDRGA RNQIAMAHMR LVISMAGKFR
NFGLPMSDLV QEGYVGLLEA AARFEPERDV RFSTYASWWI RASIQDYILR NWSIVRGGTS
SAQKALFFNL RRLRAKLAKG DTQLTLQSIH QEIAAALGVS LSDVQTMDAR LSGNDASLQA
PSVSGDAESA EKMDFLVSDD PLPDEQVSNM IDGERRRVWL ASALKHLNER EMKIISARRL
AEDGATLEEL GADLGISKER VRQIESRAME KLRSALVSAD PHMAAYA
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