Gene Rleg_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3872 
Symbol 
ID8014695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3942697 
End bp3943620 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content62% 
IMG OID644826442 
Productcyclohexadienyl dehydrogenase 
Protein accessionYP_002977654 
Protein GI241206558 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.402966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0868763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGC AGTTCGATCG GATCGCGCTG ATCGGCATCG GCCTGATCGG CTCTTCGCTC 
GCCTATGACA TCAGGCGGCT TGGTCTTGCA AGGGAGATCG TCGTCGCCAC GCGCAGCCCC
GATACGCTGA AGCGTGCGGA GGAACTCGGC CTCGGCGACC GCTACACGAC GTCTTCACAG
GATGCCGTCA AGGATGCCGA TCTGGTGATC GTCTCGGTGC CGGTCGGCGC TTCGGAAAGT
GTGGCGAAGG AGATTTCGGC AAGCCTGAAG CCCGGGGCGA TCGTCACCGA TGTCGGCTCC
ACCAAGGCTT CTGTCATTGC GCAGATGCTG CCGCATATGC CTGATAATGT GCATTTCATC
CCCGGCCACC CGCTGGCCGG TACGGAGAAA TCCGGCCCGG ATGCCGGCTT CCCCGGCCTC
TTCGAAGGCC GTTGGTGCAT CTTCACGCCG GTCGCGGATA CCGATGAGAC CGCTTTGAAG
CGGCTGCGCA GCTTCTGGGA AGCGTTGGGC TCGAAGGTCG ACGAAATGGA TGCCGAACAT
CACGACAAGG TGCTCGCCAT CGTCTCGCAC CTGCCGCATA TCATCGCCTA CAATATCGTC
GGCACCGCCG ACGATCTGGA GACGGTGACG GAGTCGGAAG TCATCAAATA TTCCGCCTCT
GGCTTTCGTG ATTTCACTCG CCTCGCCGCC TCCGACCCGA CGATGTGGCG CGACGTCTGC
CTGCATAACC GCGATGCGAT CCTCGAAATG CTGGCGCGCT TCTCGGAGGA TCTCGCCTAT
CTGCAGCGCG CCATCCGCTG GGGCGAGGGC GACAAGATTT TCGAACTCTT CACCCGCACG
CGCGCCATCC GCCGTTCGAT CGTCCAGGCC GGCCAGGATG TCGACGCGCC GGATTTCGGC
CGCCACGCGC TGGACAAGAA GTAG
 
Protein sequence
MSVQFDRIAL IGIGLIGSSL AYDIRRLGLA REIVVATRSP DTLKRAEELG LGDRYTTSSQ 
DAVKDADLVI VSVPVGASES VAKEISASLK PGAIVTDVGS TKASVIAQML PHMPDNVHFI
PGHPLAGTEK SGPDAGFPGL FEGRWCIFTP VADTDETALK RLRSFWEALG SKVDEMDAEH
HDKVLAIVSH LPHIIAYNIV GTADDLETVT ESEVIKYSAS GFRDFTRLAA SDPTMWRDVC
LHNRDAILEM LARFSEDLAY LQRAIRWGEG DKIFELFTRT RAIRRSIVQA GQDVDAPDFG
RHALDKK