| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3813 |
|---|
| Symbol | |
|---|
| ID | 8014642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3884060 |
|---|
| End bp | 3886660 |
|---|
| Gene Length | 2601 bp |
|---|
| Protein Length | 866 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644826382 |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_002977595 |
|---|
| Protein GI | 241206499 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.162309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCG AGAAATATTC GGAGCGGGTG CGCGGTTTCA TCCAGTCCGC CCAGACCTAT
GCGCTGGCGC AGGGTCACCA GCAATTCACG CCCGAACATG TGCTGAAAGT CCTGCTCGAC
GACGATCAGG GCATGGCGGC GTCGCTGATC GAGCGCGCCG GCGGCGATGC CAAGGCCGCC
CGCCTGGCCA ATGACGCGGC TCTCGCCAAG TTGCCGAAGA TCTCCGGCGG CAACGGCAAC
ATCTATCTGG CACAACCGCT CGCTAAGGTC CTTTCGACCG CCGAAGAAGC GGCGAAGAAG
GCCGGCGACA GCTTCGTAAC CGTCGAGCGC CTGCTGCAGG CGCTGGCGAT CGAATCCTCG
GCCTCGACCT TTTCGACGCT GAAGAACGCA GGCGTGACGG CCCAGGGCCT CAACCAGGTC
ATCAACGACA TCCGCAAGGG CCGGACGGCG GATTCCTCCA ATGCCGAGCA GGGTTTTGAC
TCGCTGAAGA AGTTCGCACG CGATCTCACC GCCGAAGCCC GCGAGGGCAA GCTCGACCCG
GTGATCGGCC GCGACGACGA AATCCGCCGC ACCATCCAGG TGCTTTCGCG CCGTACCAAG
AACAATCCAG TGCTGATCGG CGAACCCGGC GTCGGCAAGA CGGCGATCGT CGAGGGCCTG
GCGCTGCGCA TCGTCAACGG TGACGTGCCG GAATCGCTCA AGGACAAGAA GCTGATGGCG
CTCGACATGG GCGCGCTGAT TGCCGGTGCG AAATACCGCG GCGAATTCGA GGAGCGGCTG
AAGGCCGTGC TCAATGAAGT CCAGGCGGAA AACGGCGAGA TCATCCTGTT CATCGACGAG
ATGCACACGC TGGTCGGCGC CGGCAAGGCG GATGGGGCGA TGGATGCCTC CAACCTCCTG
AAGCCGGCTC TTGCCCGCGG TGAGCTGCAT TGCGTCGGCG CGACCACGCT CGACGAATAC
CGCAAACATG TCGAGAAGGA TCCGGCCCTT GCCCGCCGCT TCCAGCCCGT CGTCGTCGAT
GAACCGACGG TCGAAGACAC GATCTCGATC CTGCGCGGCT TGAAGGAAAA ATACGAGCAG
CATCACAAGG TGCGCATCGC CGATGCGGCG CTGGTGGCTG CGGCGACGCT TTCCAACCGC
TATATCACCG ATCGTTTCCT GCCGGACAAG GCGATCGACC TGATGGACGA GGCGGCAGCG
CGGTTGCGCA TGCAGGTGGA TTCCAAGCCG GAAGAGCTCG ACGAACTCGA CCGCCGTATC
ATGCAGCTGA AGATCGAGCG CGAAGCGCTG AAAAAGGAAA CGGACGTCGC GTCTGCCGAC
CGTCTGAAGC GGCTTGAAAC CGAAGTGACC GATCTCGAGG AACAGGCCGA TGCGCTGACG
GCCCGCTGGC AGGCGGAAAA GCAGAAACTC GGCCTTGCCG CCGATCTCAA GAAGCAGCTC
GATGATGCCC GCAACGAACT GGCGATCGCC CAGCGCAAAG GCGAATTCCA GCGTGCCGGC
GAGCTGACCT ACGGCGTCAT TCCCGATCTT GAAAAGCAGC TCGTCGATGC CGAGAAGCAG
GATGGCGACC GCGGCGCGAT GGTGCAGGAG GTGGTCACCC CCGACAATAT CGCCCATATC
GTTTCCCGCT GGACCGGCAT TCCGGTCGAC AGGATGCTGG AGGGCGAACG TGACAAGCTG
CTTCGGATGG AAGACGAACT GGCGAAATCG GTGATCGGCC AAGGCGATGC GGTTCAGGCC
GTGTCGCGCG CCGTCCGCCG CGCGCGCGCC GGCCTGCAGG ATCCGAACCG GCCGATCGGC
TCGTTCATCT TCCTCGGCCC GACCGGCGTC GGCAAGACGG AGCTCACCAA GGCGCTCGCC
CGCTTCCTCT TCGACGACGA AACGGCGATG GTGCGCATGG ACATGTCGGA ATATATGGAG
AAGCACTCCG TTGCCCGGCT GATCGGTGCA CCTCCCGGCT ATGTCGGTTA TGACGAAGGC
GGAGCGCTGA CGGAAGCCGT GCGTCGCAGA CCCTATCAGG TCGTGCTGTT CGACGAGATC
GAAAAGGCGC ATCCCGACGT CTTCAACATC CTGCTGCAGG TGCTGGACGA TGGACGCCTG
ACCGACGGTC AGGGCCGGAC GGTCGATTTC CGCAACACGA TGATCATCAT GACCTCGAAC
CTCGGCGCCG AATATCTGAC GCAACTGAGG GATGGCGACG ACAGCGACAC GGTTCGCGAG
CAGGTGATGG AGGTCGTGCG CGGGCATTTC CGGCCGGAAT TCCTGAACCG CATCGACGAG
ATCATTCTGT TCCATCGCTT GAAGCGCGAG GAGATGGGCG CGATCGTCGA TATCCAGCTG
AAGCGGCTGG TGGCTTTGCT GTCCGAGCGC AAGATCATCA TCGATCTCGA CGAGGAAGCC
CGGCACTGGC TGGCGAACAA GGGTTACGAT CCGGTCTACG GTGCAAGGCC GCTGAAGCGG
GTGATCCAGA AGTTCGTGCA GGATCCGCTG GCCGAGCAGA TCCTGTCCGG CCAGGTGCCG
GATGGATCGA CGGTGACGGT GACGAGCGGT TCGGACCGGC TGCAGTTCAG GACGAGGCAG
ACGGTGAGCG AAGCAGCGTA A
|
|---|
| Protein sequence | MNIEKYSERV RGFIQSAQTY ALAQGHQQFT PEHVLKVLLD DDQGMAASLI ERAGGDAKAA
RLANDAALAK LPKISGGNGN IYLAQPLAKV LSTAEEAAKK AGDSFVTVER LLQALAIESS
ASTFSTLKNA GVTAQGLNQV INDIRKGRTA DSSNAEQGFD SLKKFARDLT AEAREGKLDP
VIGRDDEIRR TIQVLSRRTK NNPVLIGEPG VGKTAIVEGL ALRIVNGDVP ESLKDKKLMA
LDMGALIAGA KYRGEFEERL KAVLNEVQAE NGEIILFIDE MHTLVGAGKA DGAMDASNLL
KPALARGELH CVGATTLDEY RKHVEKDPAL ARRFQPVVVD EPTVEDTISI LRGLKEKYEQ
HHKVRIADAA LVAAATLSNR YITDRFLPDK AIDLMDEAAA RLRMQVDSKP EELDELDRRI
MQLKIEREAL KKETDVASAD RLKRLETEVT DLEEQADALT ARWQAEKQKL GLAADLKKQL
DDARNELAIA QRKGEFQRAG ELTYGVIPDL EKQLVDAEKQ DGDRGAMVQE VVTPDNIAHI
VSRWTGIPVD RMLEGERDKL LRMEDELAKS VIGQGDAVQA VSRAVRRARA GLQDPNRPIG
SFIFLGPTGV GKTELTKALA RFLFDDETAM VRMDMSEYME KHSVARLIGA PPGYVGYDEG
GALTEAVRRR PYQVVLFDEI EKAHPDVFNI LLQVLDDGRL TDGQGRTVDF RNTMIIMTSN
LGAEYLTQLR DGDDSDTVRE QVMEVVRGHF RPEFLNRIDE IILFHRLKRE EMGAIVDIQL
KRLVALLSER KIIIDLDEEA RHWLANKGYD PVYGARPLKR VIQKFVQDPL AEQILSGQVP
DGSTVTVTSG SDRLQFRTRQ TVSEAA
|
|---|
| |