Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3676 |
Symbol | |
ID | 8014520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3725119 |
End bp | 3726225 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644826239 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_002977458 |
Protein GI | 241206362 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.318097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGTC GTTCGTTTTT CAAGAAGGCG GGAACCGCCG GCGCCGGTGC GGTTGCCGCA ACGGCATTGG CTGCGCCTGC GATCGCGCAG GAGAATCCGA AGATCGCGTG GCGCATGACG TCGTCGTTTC CGAAGAGCTT GGATACGATC TATGGCGGCG CCGAGGATAT CGCCAAGCAT GTTGCCGCGG CGACGGATGG CAATTTCACG ATCCAGCCCT TTGCGGCCGG TGAAATCGTG CCGGGCCTGC AGGCCGTCGA TGCCGTTGCC GCCGGCACGG TCGAGGCAGC CCATACCACC TCCTATTATT TCGTCGGCAA GGACCCGACC TATGCCATCG GGACGGCCAT TCCGTTCGGG CTGAACAGCC GTCTGACCAA TGCCTGGTAC TATGAAGGCA ACGGCAACAA GCTGATGAAC GAGTTTTATG CCACACAGGG AATGTATGCG CTGCCGGCCG GCAATACCGG TGCGCAGATG GGCGGCTGGT TCCGCAAGGA AATCAACACG CTCGATGACC TTAAGGGCGT CAAGATGCGC ATTGCCGGCC TTGCCGGTCG CGTCATGGAG AAGGTCGGCG TCATCCCGCA GCAGATCGCC GGCGGCGATA TCTATCCGGC GTTGGAAAAA GGCACGATCG ATGCGGCGGA ATTCGTCGGC CCCTATGACG ACCTGAAGCT CGGCTTCCAC AAGGTGGCGA AGTACTACTA TTATCCGGGC TGGTGGGAAG GTGGCCCGAC GGTGCATGGG TTCTTCAATC TCGAAAAATG GAGCAGCCTG CCCAAGCATT ATCAGGCAGC GCTGACCGAC GCCTGCGCCT TCGCCAATAC CAACATGCTG GCGAAGTACG ACACGAAGAA CCCGACGGCG CTGAAGCAGC TCGTGGCGGA AGGCGCGACG CTGCGCCCGT TCAGCCAGGA GATCATGGAA GCCTGCTTCC AGGCGGCGAC GGGCATCTAC AGCGAAATTT CGGGCACGAA CCAGTATTTC AAGAAGATCT ATGACGACCA GACCGCCTTC AAGCGGGATG CCTATCTGTG GATGCAGCTG TCGGAATACA CCTTCGATAC GTTCATGATG ATTCAGCAGC GGGCCGGAAA GCTTTAA
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Protein sequence | MDRRSFFKKA GTAGAGAVAA TALAAPAIAQ ENPKIAWRMT SSFPKSLDTI YGGAEDIAKH VAAATDGNFT IQPFAAGEIV PGLQAVDAVA AGTVEAAHTT SYYFVGKDPT YAIGTAIPFG LNSRLTNAWY YEGNGNKLMN EFYATQGMYA LPAGNTGAQM GGWFRKEINT LDDLKGVKMR IAGLAGRVME KVGVIPQQIA GGDIYPALEK GTIDAAEFVG PYDDLKLGFH KVAKYYYYPG WWEGGPTVHG FFNLEKWSSL PKHYQAALTD ACAFANTNML AKYDTKNPTA LKQLVAEGAT LRPFSQEIME ACFQAATGIY SEISGTNQYF KKIYDDQTAF KRDAYLWMQL SEYTFDTFMM IQQRAGKL
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