| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3580 |
|---|
| Symbol | |
|---|
| ID | 8015820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3614091 |
|---|
| End bp | 3615827 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644826145 |
|---|
| Product | gamma-glutamyltransferase |
|---|
| Protein accession | YP_002977365 |
|---|
| Protein GI | 241206269 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.229628 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCC TGCATATCGG GACGATCTCC GTCATATCAG CTTTGTCGCT GAGCCTGACC
TCGGCTTTCG CCGCCTCGCC TGCGCCCGTC GAAGCCGAGC ACGGCATGGT CGTCACCGCC
CAGCATCTGG CGACCGATGT CGGTGTCGAC GTGCTGAAAA GCGGCGGTAA CGCCGTCGAT
GCGGCGGTCG CCGTCGGTTA TGCGCTGGCG GTGGTCTATC CCTCGGCCGG CAATCTCGGC
GGTGGCGGCT TCATGACCAT CCGCCTGAAG GACGGCACGA AGACCTTCCT CGATTTTCGC
GAACGCGCGC CGCTTGCCGC AACGAAGACT ATGTATCTCG ATGCCAAGGG CGATATCGTG
CCGCGCGCCA GCCTCGACGG CTATCTTGCC GTTGGCGTGC CGGGCTCCGT CATGGGCTTC
GAGACCGCGC GCGAGAAATA CGGCAGCAAG TCGCGCGAAG AACTGATCGC GCCGGCACTT
CGCTTCGCCA AGGAAGGTTT CACGCTGGAA CAGGGCGACG CCGCAAGTTT CGCCGGCAAC
GCCAAGCGCC TCGCCAAGGA TGAGGCGGCG GCGAAGATCT TCCTGAAACC TGATGGTAAA
CCCTATGCAT CCGGCGAAAA ACTCCAGCAG CCGGACCTTG CCGCAGTCCT GGCAGGCATT
TCCGAAAAAG GCCCCGACGC CTTCTACAAG GCCGCCCCCG CCGAGGCGAT CGTCAAGGCG
AGCCAGGCCA AGGGCGGCAT CCTCGCCAAG GAGGATTTCG AGCAATATGC CGTGCGGGAA
TTGAAGCCGA TCGAGTGCAA TTACCGCGGC TACGACATCA TTTCCTCGCC ACCGCCGTCT
TCCGGCGGCG TCATCATCTG CGAGATCCTC AACGTTCTCG AAGGTTATCC GCTCTCCTAT
CTCGGCTATA ACTCGGCCGA AACCGTGCAC ATCATGGTCG AGGCCATGCG CTACGCCTAT
GTCGACCGCA ATGCAGCGCT CGGCGATCCT GATTTCGTCG AGAACCCGGT CGAGAAACTG
CTCGACAAGA AATATGCCTC GGAAATTGCC GCCAAGATCG ATCCCTACAG GGCCGGCGCC
TCGGCGAACC TGAAACCGCT CGGCGGCAAG GAAAGCACCG AGACGACGCA TTATTCGATC
GTCGACGACG AGGGCAATGC GGTCGCCGTC ACCTATACGC TGAACGGCTC CTTCGGCGCC
GCGGTCGTCG CGCCCGGCAC GGGTGTCCTA CTCAACAACG AGATGGACGA TTTCACCTCC
AAGCCCGGTG TGCCGAACCT CTACGGATTG GTGCAGGGCG AAGCCAATGC CATCGCCCCG
AAGAAGACGC CGCTTTCCTC GATGAGCCCG ACGATCGTCA CCCGGGACGG CAAACCATTC
ATGGTGATCG GCAGCCCCGG CGGCTCGCGC ATCATCACCA TCACATTGGA AGCGATCCTC
AATGTCGTCG ATTTCGGCAT GGATATCAGT CAGGCGGTCA ACGCCCCGCG TGTCCACCAC
CAATGGCAGC CCGACAAGGT CTTTCTCGAA CCCTATGCAC TCTCGCCCGA TACCGAAAAG
ACGCTTGCCG CCATGGGCTA CAGCTTCGAT GGCGGCAATG ACGCGCCGCA ATGGGGCCAG
GCCGCAGGCA TCCTCGTCGG CGGCAAAAGC CTTGCGGCAA TCGAAAAGGG CGGCGGCGCC
CGCTACAATG GCGCCATGGA TAGCCGCGCA GCGGAAGGGT CGGCAAGCGG CTACTGA
|
|---|
| Protein sequence | MGRLHIGTIS VISALSLSLT SAFAASPAPV EAEHGMVVTA QHLATDVGVD VLKSGGNAVD
AAVAVGYALA VVYPSAGNLG GGGFMTIRLK DGTKTFLDFR ERAPLAATKT MYLDAKGDIV
PRASLDGYLA VGVPGSVMGF ETAREKYGSK SREELIAPAL RFAKEGFTLE QGDAASFAGN
AKRLAKDEAA AKIFLKPDGK PYASGEKLQQ PDLAAVLAGI SEKGPDAFYK AAPAEAIVKA
SQAKGGILAK EDFEQYAVRE LKPIECNYRG YDIISSPPPS SGGVIICEIL NVLEGYPLSY
LGYNSAETVH IMVEAMRYAY VDRNAALGDP DFVENPVEKL LDKKYASEIA AKIDPYRAGA
SANLKPLGGK ESTETTHYSI VDDEGNAVAV TYTLNGSFGA AVVAPGTGVL LNNEMDDFTS
KPGVPNLYGL VQGEANAIAP KKTPLSSMSP TIVTRDGKPF MVIGSPGGSR IITITLEAIL
NVVDFGMDIS QAVNAPRVHH QWQPDKVFLE PYALSPDTEK TLAAMGYSFD GGNDAPQWGQ
AAGILVGGKS LAAIEKGGGA RYNGAMDSRA AEGSASGY
|
|---|
| |