Gene Rleg_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3542 
Symbol 
ID8014406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3577753 
End bp3579051 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content65% 
IMG OID644826107 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002977327 
Protein GI241206231 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAA ATCTGCTGTC CGTCGCCGCG TTGCTCTTTG GCACGCTCTT CCTTTTCATG 
GGCAACGGCC TGCAGGGCAT CCTGCTCCCC GTCCGCGGCA ATCTCGAAGG CTACGCAACG
ACGACGCTCG GCCTGCTCGG CACCTCATGG GCCGGGGGCT TCGTCATCGG TTGCCTGGTT
GCGCCGAAGA TCGTGCGCCG CGTCGGCCAT GTGCGTGCCT TTTCGGGCTT CATCTCGATC
ATCGCCATCA TCGCGCTGGT CAGCGGTATC ATCATCGATC CGGTCTGGTG GGTGGTCCTG
CGCGCCGTCA CCGGCTTCTC CACTGCCGGT ACGTCGATGA TCATCGAAAG CTGGCTGAAC
GAGCGCGCCA GCAACGAGAG CCGCGGCATG ATCTTCTCGC TCTATATCGG CATCACACTA
CTTGGCGTCG TCGGCGGCCA GATGATGATC CCGCTCGAGG ATGTGCGCAC GCCGGTTCTG
TTCATGATCT GCGGCATCTT CTATTGCATC GCCATGCTGC CGACGACGCT GTCGACCGCT
GCTTCGCCGC AGCCGCTGAA GGCGGTGCGC CTCGACCTGC CGGCGCTCTA TCGCAACTCG
CCGGTCTCCT GCCTCGGCAT CCTGCTCGTC GGCATCGCCA ACGGCGCCTA CGGCACGCTC
GGCGCCGTCT TCGGCGCCGG CGCCGGCCTG TCCGACACCA ACATCGCCGT CATGATGAGC
GCCACCATCT TCGCCGGGGC GGTGATGCAG CTGCCGGCCG GCCGGCTTTC CGACCGCATC
GACCGGCGCT ACGTGCTCGC CGCCATGTCG GGCATCGCCG CCCTTGCCGG CTTGCTGATC
TTTCTGCTCC ACCCGACGTC CCCCGCCTTG CTGATCGGGC TTGTGGTCCT CTACGGCGCG
GTGGCGAATA CGCTCTATCC GATCGCCGTC GCCCACGCGA ACGACTTCGC GGCCTCGGAG
GATTTCGTCA AGGTCTCCGG CGGCTTGCTG CTGCTTTACG GCATCGGCAC GATGATCGGC
CCGACGCTCA GCGGTCCCGT CATGTCGGCG ATCACCCCGC ATGCGCTTTT CCTCGTCACC
GCCATCGCCC ATGTGCTGAT CACCGTTTAC GCCATCATCA GGAGCCGCAT CCGCGCCGCC
GTGCCGGCCA GCGACCGCGA CGCCTACACG ACGATCCCGA CCGGCACCTC GCAGATGCTG
ACACCGCAAA GCATGTCGCT TGCCGATCGC GGCGCCGGCA AACCTCCCGA AACGGAAAAG
TCTCCCGAAA GCGGCGATCC TGCTGTAAAG TTCGGCTAG
 
Protein sequence
MKRNLLSVAA LLFGTLFLFM GNGLQGILLP VRGNLEGYAT TTLGLLGTSW AGGFVIGCLV 
APKIVRRVGH VRAFSGFISI IAIIALVSGI IIDPVWWVVL RAVTGFSTAG TSMIIESWLN
ERASNESRGM IFSLYIGITL LGVVGGQMMI PLEDVRTPVL FMICGIFYCI AMLPTTLSTA
ASPQPLKAVR LDLPALYRNS PVSCLGILLV GIANGAYGTL GAVFGAGAGL SDTNIAVMMS
ATIFAGAVMQ LPAGRLSDRI DRRYVLAAMS GIAALAGLLI FLLHPTSPAL LIGLVVLYGA
VANTLYPIAV AHANDFAASE DFVKVSGGLL LLYGIGTMIG PTLSGPVMSA ITPHALFLVT
AIAHVLITVY AIIRSRIRAA VPASDRDAYT TIPTGTSQML TPQSMSLADR GAGKPPETEK
SPESGDPAVK FG