Gene Rleg_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3509 
Symbol 
ID8014377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3543768 
End bp3544514 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID644826074 
Producthypothetical protein 
Protein accessionYP_002977294 
Protein GI241206198 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.208978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCC ATTCACAGTT TAAAAACATC ATGCACCGCA AAGGCCGTCA GGATGCCGTG 
CGGTCGAAAA TGTTCTCCAA GCTTGCGCGC GAAATCACCG TTGCCGCCAA GGCCGGCCTG
CCCGACCCGA CGATGAACGC CCGCCTTCGC CTGGCGATCC AGAACGCCAA GGCCCAGTCC
ATGCCGAAGG ACAATATCGA CCGCGCCATC AAGAAGGCAG CCGGCGCCGA CGGCGAGAAC
TACGACGCAG TCCGTTACGA AGGCTACGGC CCCGGCGGCA CGGCGATCAT CGTCGAGGCC
CTGACCGACA ATCGCAACCG CACCGCCTCC AACGTCCGCT CGAGCTTCAC CAAGGCCGGC
GGCGCTCTCG GCGAAACCGG TTCTGTTTCC TTCTCCTTCG ACCATGTCGG CGAAATCACC
TACAAGCTTT CCGTCGGCGA TGCCGACAAG GTGATGGAAG CCGCGATCGA AGCCGGCGCC
GATGACGTCG AGACCGACGA AGACGGCCAC TACATCACCT GCGGCTTCGA AGCCCTCGGC
GAAGTGGCGA AAGCGCTGGA ATCGAGCCTC GGCGAAGCCG AAACCGTCAA GGCCGTCTGG
CGCGCCCAGA ACAACGTGCC GGTAGACGAG GAAAAAGCTC AGTCGCTGCT GAAACTTATC
GACAGCTTGG AAGATGATGA CGACGTTCAG AACGTCTATT CCAACTTCGA GGTCTCGGAA
GAAGTGCTGG CAAAGCTCTC GGCCTGA
 
Protein sequence
MAGHSQFKNI MHRKGRQDAV RSKMFSKLAR EITVAAKAGL PDPTMNARLR LAIQNAKAQS 
MPKDNIDRAI KKAAGADGEN YDAVRYEGYG PGGTAIIVEA LTDNRNRTAS NVRSSFTKAG
GALGETGSVS FSFDHVGEIT YKLSVGDADK VMEAAIEAGA DDVETDEDGH YITCGFEALG
EVAKALESSL GEAETVKAVW RAQNNVPVDE EKAQSLLKLI DSLEDDDDVQ NVYSNFEVSE
EVLAKLSA