Gene Rleg_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3498 
Symbol 
ID8014368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3534417 
End bp3534872 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content62% 
IMG OID644826063 
Productprotein TolR 
Protein accessionYP_002977283 
Protein GI241206187 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.124794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATGG CTGTTGGAGG CAATGGCGGC GGGGGCGGCG GACGCCGCCG TCGTGGCGGT 
CGGAACAGGG CCGTAATTTC CGAAATCAAC GTGACGCCGC TCGTCGACGT CATGCTGGTG
CTTTTGATCA TCTTCATGGT CGCGGCACCG ATGATGACCG TCGGCGTGCC GATCGACCTG
CCGGAAACGC AGGCCAAGGC GCTGAATTCC GAGACACAGC CGATCACCAT TTCCGTCAAG
AATGACGGCG AGGTGTTCCT GCAGGAAACG CCGATCCCGG CCGCGGAGAT CGCCGCCAAG
CTCGAGGCGA TCGCCACGAC CGGCTATAAC GAACGTATCT TCGTGCGCGG CGATGCGACC
GCGCCTTATG GCGTCATCGC CGATGTCATG GCCCGTATTC AGGGCGCAGG CTTCAAGAAT
ATCGGCCTCG TGACGCAGCA GAAGAAGGAC CAATAG
 
Protein sequence
MGMAVGGNGG GGGGRRRRGG RNRAVISEIN VTPLVDVMLV LLIIFMVAAP MMTVGVPIDL 
PETQAKALNS ETQPITISVK NDGEVFLQET PIPAAEIAAK LEAIATTGYN ERIFVRGDAT
APYGVIADVM ARIQGAGFKN IGLVTQQKKD Q