| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3491 |
|---|
| Symbol | |
|---|
| ID | 8014362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3526177 |
|---|
| End bp | 3528123 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644826056 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_002977276 |
|---|
| Protein GI | 241206180 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.202032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0464003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGGGA GTTCAATGAA CCCTAACTTA CGTAATTTCG CCTTGTGGGC GATCATAGCG
CTTCTGCTGA TCGCCCTTTT CAGTATGTTT CAGACGGCGC CGGCGCAGAC GGGCTCCCGC
GAAATCCCTT ATTCGCAGTT TCTGCGTGAG GTCGATGCGG GCCGCGTGAA GGATGTCGTG
GTCACGGGCA ACCGTCTCTC CGGAAGCTAT GTTGAAAATG GCACCACCTT TCAGACCTAT
TCGCCTGTGA TCGACGACAG TCTGCTCGAT CGCCTGCAGT CGAAGAACGT CCTGGTTTCC
GCCCGTCCTG AAACGGACGG CTCTTCGGGT TTCCTCAGCT ATCTCGGCAC GCTTTTGCCG
ATGCTTCTGA TTCTCGGCGT CTGGCTGTTC TTCATGCGGC AGATGCAGGG CGGCTCACGC
GGGGCGATGG GCTTCGGCAA GTCCAAGGCC AAGCTGCTCA CCGAAGCGCA TGGCCGCGTG
ACTTTCGAAG ACGTTGCCGG TGTCGACGAG GCCAAGCAGG ATCTCGAGGA AATCGTCGAA
TTCCTGCGTG ATCCGCAGAA GTTCCAGCGT CTCGGTGGCA AGATCCCGCG CGGCGTGCTG
CTCGTCGGTC CTCCGGGCAC CGGCAAGACG CTGCTCGCCC GCTCGGTCGC CGGCGAAGCC
AACGTGCCCT TCTTCACCAT TTCGGGCTCC GACTTTGTCG AAATGTTCGT CGGCGTCGGC
GCAAGCCGGG TGCGCGATAT GTTCGAGCAG GCGAAGAAGA ACGCGCCCTG CATCATCTTC
ATCGACGAAA TCGATGCCGT CGGCCGCCAT CGCGGCGCCG GTCTCGGCGG CGGCAATGAC
GAACGCGAGC AGACGCTGAA CCAGTTGCTG GTCGAAATGG ACGGCTTCGA GGCGAATGAA
GGCGTGATCC TGATCGCCGC TACCAACCGT CCCGACGTTC TCGACCCGGC GCTGCTGCGT
CCCGGCCGTT TCGACCGTCA GGTCGTGGTG CCGAACCCCG ACATCGTCGG CCGCGAACGC
ATTCTCAAGG TGCATGCCCG CAACGTTCCG CTGGCGCCGA ATGTCGATCT CAAGATCCTC
GCCCGCGGTA CGCCCGGTTT CTCCGGCGCC GACCTGATGA ACCTCGTCAA CGAAGCCGCC
CTCATGGCGG CCCGCCGCAA CAAGCGCGTC GTCACCATGC AGGAATTCGA GGACGCCAAG
GACAAGATCA TGATGGGCGC CGAGCGCCGT TCCTCGGCGA TGACCGAGGC GGAAAAGAAG
CTCACCGCTT ACCATGAGGC CGGACACGCC ATGACCGCGC TCAATGTGGC CGTCGCCGAT
CCGCTGCACA AGGCGACGAT CATTCCGCGC GGCCGTGCGC TCGGCATGGT CATGCAGCTT
CCCGAGGGCG ACCGCTACTC GATGAGCTAC AAGTGGATGG TCTCACGCCT CTGCATCATG
ATGGGCGGCC GCGTTGCCGA AGAGCTCACC TTCGGCAAGG AAAACATCAC TTCGGGTGCC
TCTTCCGACA TCGAACAGGC CACGAAGCTT GCCCGCGCCA TGGTCACGCA GTGGGGCTTT
TCCGATCAGC TCGGTCAGGT CGCCTATGGC GAGAACCAGC AGGAAGTCTT CCTCGGCCAC
TCGGTTTCGC AGTCGAAGAA TGTTTCGGAA GCAACCGCGC AGAAGATCGA CAATGAAGTG
CGCCGCCTGA TCGACGAAGC CTATACGCAG GCCCGCACGA TCCTGACGGA AAAGCACGAC
GAATTCGTCG CGCTTGCCGA AGGTCTGCTC GAATACGAGA CACTGACCGG CGAAGAGATC
AAGGCGCTGA TCCGCGGCGA AAAGCCTTCC CGCGATCTCG GTGATGATTC GCCGCCAAGC
CGCGGCTCAG CCGTTCCGAA GGCCGGCGCA CGGCCTGCCA CCAAGGGTGA CGAGCCCGAA
GGCGGCCTCG AACCGCAGCC GCATTGA
|
|---|
| Protein sequence | MLGSSMNPNL RNFALWAIIA LLLIALFSMF QTAPAQTGSR EIPYSQFLRE VDAGRVKDVV
VTGNRLSGSY VENGTTFQTY SPVIDDSLLD RLQSKNVLVS ARPETDGSSG FLSYLGTLLP
MLLILGVWLF FMRQMQGGSR GAMGFGKSKA KLLTEAHGRV TFEDVAGVDE AKQDLEEIVE
FLRDPQKFQR LGGKIPRGVL LVGPPGTGKT LLARSVAGEA NVPFFTISGS DFVEMFVGVG
ASRVRDMFEQ AKKNAPCIIF IDEIDAVGRH RGAGLGGGND EREQTLNQLL VEMDGFEANE
GVILIAATNR PDVLDPALLR PGRFDRQVVV PNPDIVGRER ILKVHARNVP LAPNVDLKIL
ARGTPGFSGA DLMNLVNEAA LMAARRNKRV VTMQEFEDAK DKIMMGAERR SSAMTEAEKK
LTAYHEAGHA MTALNVAVAD PLHKATIIPR GRALGMVMQL PEGDRYSMSY KWMVSRLCIM
MGGRVAEELT FGKENITSGA SSDIEQATKL ARAMVTQWGF SDQLGQVAYG ENQQEVFLGH
SVSQSKNVSE ATAQKIDNEV RRLIDEAYTQ ARTILTEKHD EFVALAEGLL EYETLTGEEI
KALIRGEKPS RDLGDDSPPS RGSAVPKAGA RPATKGDEPE GGLEPQPH
|
|---|
| |