Gene Rleg_3475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3475 
Symbol 
ID8014346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3509062 
End bp3510234 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content62% 
IMG OID644826039 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002977260 
Protein GI241206164 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.361368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TATTTCTGGC CGCCGTTGCG GCCGTCGTGC TCAGCGGCAC GGCCTATGCA 
GACACCATCA AGGTCGGCGT CATCGGCCCG TTCTCCGGTC CGTTCGCGCT GCAGGGCAAG
AACTTCAAGG CCGGCATCGA CGCCTATATG GCGGTCAACG GCAACACGGT CGGCAGCGAT
ACGGTCGAGA TCGTCTATCG CGACGTGCCG CAGGCCGACC CCGCCCAATC CAAGGCGCTG
GCGCAGGAAC TGATCGTCAA GGAAAAGGTC CAGTATCTTG CCGGCTTCTA CTTCACGCCC
GATGCCATGG CGGTCACGCC GATCCTGAAA CAGGGCAATG TGCCGATGGT CATCATGAAC
GCCGCCACCT CGGCGATCGT CACCAAGAGC CCGCTCGTCG TCCGCACCTC GTTTACCACC
TGGCAAACTT CGACGCCGAT TGCCAAGGTC GCCTTCGACG CCGGCGTCAA GAAGGTGATT
TCCGTCGTCA GCGATTACGG CCCCGGCATC GACGCCGAGA ACGCTTTCAA GGCCGGCTTC
GAAAAGGCCG GCGGCCAGGT GGTCGAGGCG ATCCGCATGC CGCTTGCGAC CAACGACTTC
AGCCCGATCA TGCAGCGCAT CATGGATTCC GGAGCGGAGG GCGTGTTCGC CTTCCTGCCC
TCCGGTCCGA CGACGCTCGG CTTCGTCAAG GCTTACAACG ACAATGGCCT GAAGGCTGCC
GGCATCAAGT TCTTCGCGCC GGGTGACCTG ACGCAGGAAT CCGATCTGCC GGCGCTCGGC
GATGCCGCAC TCGGCATCCA GACGACCTTC CACTATGCCG TGTCGCACGA TTCTCCTGAG
AACAAGGCTT TCGTCGAGGC GGCGACCAAA GCGATCGGCA ACAAGGCCGA ACTTTCCTTC
CCCTCAGTCA GCGCCTATGA CGGCATGTAT GTCATCTACA AGATGATCGA GGCGACGGGC
GGCAAACAGG ATGCTGAGAA GGCCGTCGAT GCGGTCAAGG GCCTTGCCTG GACGAGCCCG
CGCGGCCCGG TTTCGATCGA TCCGGAAAGC CGTCACATCA CGCAGAACAT CTATCTGCGC
GAAGTGACGA AAGCCGATGA CGGGACCTAC ATCAACAAGG AGATCCAGAC TTTCGAGAAG
CAGGGCGATC CGGGCCTGGC GGCCGTCAAG TAA
 
Protein sequence
MKKLFLAAVA AVVLSGTAYA DTIKVGVIGP FSGPFALQGK NFKAGIDAYM AVNGNTVGSD 
TVEIVYRDVP QADPAQSKAL AQELIVKEKV QYLAGFYFTP DAMAVTPILK QGNVPMVIMN
AATSAIVTKS PLVVRTSFTT WQTSTPIAKV AFDAGVKKVI SVVSDYGPGI DAENAFKAGF
EKAGGQVVEA IRMPLATNDF SPIMQRIMDS GAEGVFAFLP SGPTTLGFVK AYNDNGLKAA
GIKFFAPGDL TQESDLPALG DAALGIQTTF HYAVSHDSPE NKAFVEAATK AIGNKAELSF
PSVSAYDGMY VIYKMIEATG GKQDAEKAVD AVKGLAWTSP RGPVSIDPES RHITQNIYLR
EVTKADDGTY INKEIQTFEK QGDPGLAAVK