Gene Rleg_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3460 
Symbol 
ID8014331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3492151 
End bp3493485 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content65% 
IMG OID644826024 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002977245 
Protein GI241206149 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0376131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATG CAAAGATCCT GCTGGTCGAC GACGAGGAGG AACTGCGCCG CTCGACGGCG 
CAGGCGCTGG AGCTCTCCGG CTTCAGCGTC GAGACCTATT CGAACGGCGA CCACGTGCTG
GAGCTGATCG GCTACAGCTT TCCCGGCGTC GTTGTCAGCG ATATTCGCAT GCCCGGCATC
GACGGCATGA CGCTGATGCA GAAGATCCGC GAGCTCGACC CGGAGGTACC GGTCATTCTC
GTCACCGGCC ACGGCGACGT TCAGCTTGCG GTGAAGGCGA TGCGCGAAGG CGCCTATGAT
TTCATCGAGA AGCCGTTCAC GCCGGAGATG CTTGCCGGCG TCATCCGCCG GGCGATGGAG
CGGCGCGGCC TGGTGCTCGA AAACCGGCTG CTGAAGGCGG TCGCCGGCAA GCGCGACGAT
ATCGAGGCGC GGCTGCCGGG GCGCACGCAG GTGATGGTGG ATCTGCGCTA CCGCATCCGG
GCGATCGGGG CGAGCGATGC CGATACGCTG ATCGTCGGCG AGACCGGGGC CGGCAAGGAG
GTGGTGGCGC GGGCGCTCCA CGACATCAGC GCCCGGGCGA GCCGGCCGTT CATCGCGATC
AATTGTGCCG CACTGCCGGC GAACCTGATC GAGAGCGAGC TCTTCGGCCA TGAGGTGGGG
GCATTTCCGG GTGCGGTAAG GCCGCGTTAT GGAAAGTTCG AACACGGGCG CGGCGGCACG
ATCCTGCTCG ACGAGATCGG CTCCATGCCC TTCGACCTGC AGGCGAAGTT CCTGCGGGTG
CTGCAGGAGC GGGTGATCTC CAGGCTCGGA TCGAACGAGG TCGTGGCGCT CGACGTGCGC
TTCATCGCGA CAAGCAAGGT CGATCTGGAA GCGGAGGTGG CGGCCGGGCG TTTCCGCGCC
GACCTCTTCT ATCGGCTGAA CGTCGCGACG CTGCACGTGC CGTCTCTGTC GCAGCGGCGG
GCGGATGTTC CGCTGCTTTT CCTGCAGCTG GTGCGGGAAG CGGCTGCTCG CTACGGCCGC
GACGAGATGG TCGTTCCGCC GGACGTGACT TCCGACATCG CTCAGCGCGA CTGGCCCGGC
AATGTGCGTG AATTGAGGAA TGCCGCCGAT CGTCTGGTCC TCGGGCTCGA CAATGGCGGG
CGCCAAGCCG AGGAAGCGAC CGGGCTTGCT GAGCGTGTCG CCGAATTCGA ACGAGGGGTC
ATTGCCAGCG CGCTGGTGGC GCATGGCGGC AGCCTCAGAC CGGTCTATGA GTCGCTCGGC
ATTTCCCGGA AGACACTCTA CGAAAAGATG CAGAAATACG GTCTCGACAA GCGGATGCTG
ACCACCGAAG GCTAG
 
Protein sequence
MNDAKILLVD DEEELRRSTA QALELSGFSV ETYSNGDHVL ELIGYSFPGV VVSDIRMPGI 
DGMTLMQKIR ELDPEVPVIL VTGHGDVQLA VKAMREGAYD FIEKPFTPEM LAGVIRRAME
RRGLVLENRL LKAVAGKRDD IEARLPGRTQ VMVDLRYRIR AIGASDADTL IVGETGAGKE
VVARALHDIS ARASRPFIAI NCAALPANLI ESELFGHEVG AFPGAVRPRY GKFEHGRGGT
ILLDEIGSMP FDLQAKFLRV LQERVISRLG SNEVVALDVR FIATSKVDLE AEVAAGRFRA
DLFYRLNVAT LHVPSLSQRR ADVPLLFLQL VREAAARYGR DEMVVPPDVT SDIAQRDWPG
NVRELRNAAD RLVLGLDNGG RQAEEATGLA ERVAEFERGV IASALVAHGG SLRPVYESLG
ISRKTLYEKM QKYGLDKRML TTEG