| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3366 |
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| Symbol | |
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| ID | 8014246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 3376286 |
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| End bp | 3379474 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644825925 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002977152 |
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| Protein GI | 241206056 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0201859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTG CTCATTTTTT CGTGGACCGG CCGATCTTTG CGGCCGTCAT CTCGATCCTT
TTTCTCGTTG TCGGCAGCAT TGCCTACACG CAATTGCCGG TATCGCAGTA TCCGGAGATA
GCGCCGCCGA CCATCGTCGT GCGCACCTCC TATCCGGGTG CCGACCCGCA GACGATCGCC
GATACCGTTT CGACGCCGCT CGAACAACAG ATCAACGGCG TCGAAGACAT GCTTTATATG
TCTTCCTACT CCAGCGCCGA CGGCGCCATG TCGCTGACGA TCACCTTCAA GCTCGGCACC
GATCTCGACA AGGTCCAGGT GCTCGTCCAG AACCGCGTTT CCATCGCCCT TCCCCGTCTT
CCCGAGGAAG TCCAGCGGCT TGGCGTGACC ACCGACAAAA GCTCACCGGA TCTGATGATG
GTGGTGCACC TGCTTTCGCC ATCGCACCGC TATGACCAGC TTTACGTCTC GAATTACGCC
CGCAACCGCA TCCGCGACGT TCTCGTGCGC CTTGACGGCG TCGGCGACGT GCAGATTTTT
GGCGAACGCC AGTATTCGAT GCGAATCTGG CTGGATCCGG AAAAGCTCTC CGCTTACGGG
ATGACATCCG ATGACGTCGT CTCCGCGTTG AGAGATCAGA ACGTCCAGGT TTCAGGCGGC
AAGATCGGGG CCCCGCCCGT CACCGGCAAG AATGCATTCG AATATACGGT GCGAACGGAC
GGCCGCTTCT CCGACGTGCG CGAGTTCCGA TATGTCATTG TGAAATCGAC GACATCGGGC
CGCCTCGTGC AGTTGCAGGA TGTCGCCCGG ATAGAACTCG GCGCACAGGA TTACGTCACC
AACAGTTATC TCAACAACGA TCCCGCAGTG GCTCTCGGCA TCTTCGCCCG GCCGGGAACC
AACGCACTGG ACACGGCCCA TCAAGTCCAG ACGCTCATGA AGGACATATC CCAGAATTTC
CCGCCGGGTC TGGAATATCG TATCGTCTAC GACACGACCG AATTCATCTC GGATTCGATT
ACCGAGGTCT ATAGAACCAT TGCAGAAGCG GCCATCCTGG TGGCGATCGT CGTTCTTGTC
TTCCTGCAAT CCTGGCGAAC CGCAATCATA CCGATCATTG CCATCCCGGT ATCGCTGATC
GGCACCTTCG CGGTTCTGCT CGCCTTCGGC TTCTCGCTCA ACATGCTCAC TTTGTTCGGC
CTTGTCCTAG CGATCGGGAT CGTCGTGGAT GACGCGATCG TGGTGGTGGA AAACGTCGAG
CGCAATCTGG CGCGCGGCAT GACGCCGAAG CAGGCGTCCC ATGTCACGAT GGACGAAGTC
GGAACCGCCG TCGTCGCCAT CTCGCTGGTG CTGATCGCCG TGTTCGTCCC GACAGCCTTC
ATTCCAGGAA TCTCTGGCCA GTTCTACAGG CAGTTCGCGG TGACGATCTC CGTCACCACT
GCAATTTCCG CATTGAATTC GCTCACACTG TCGCCCGCAC TCGCAGGCAT ATTGCTGAAA
GCCCATGACC ACGAAACCAA ACGCATGAAT GTCGCATCCC GTCTGGGGAG AGGGCTTGCG
GACGGCTTCA ATCATGGATT CGATCGGCTA AGCTCCGGCT ATTCATGGAC CGTTCGGCAT
CTGGTCAGCA GTTGGGTGGG CTTGACTGCC GCGATGGTCA CGTTCGTCTG CCTGCTCGGA
GCGACATGGT ATATGGGCAC GAAAGTTCCC GCGGGCTTTA TTCCGACCAT GGACCAGGGT
TACGCAATCA TCGTCATACA GCTTCCTGAT GGAGCCTCGC TCGCGCGTAC CGACGCCGTC
GTCAAACAGG TGGGCGATAT CGCCCGCACC GTGCCCGGCG TCGGCAATGC CGTGCAATTT
GCCGGCTTCA GCGGGGCGAC GTTCACCAAT GCCTCAAATG CCGGCGTCGT CTTCGTTCCA
TTCAAATCCT TTGCCGAACG TGAAGAAGGC GGCGAGAACG CCAACAAGAT CATCGGCGAG
CTTTACGGAA AGCTGCAAAG CATCCAGGAA GCCTTCATCA TCGCCATTCC ACCGCCATCC
GTGCGTGGCG TCGGCAATTC CGGCGGCTTC AAGATGCAGA TTTCCGATCT CGAAAACGCC
GATATGACTC GCGTGCTCGG CCTCGCCCGG CAGATGATGG GTGCGGCGGC AACGACCGAG
GGGCTGACCG GCGTCTTTAC GACATTTTCG GATGCCAGCC CGCAATACTT CCTGGCGATC
GACCGCGACA AGGCGCGTTT CCTGAATGTG CCGATCCCCA ATATCTTCAA CGCCCTTTCC
ATCAATCTCG GCGTCGCCTA TGTGAACGAT TTCAATGCGT TCGGCCGCGT CTATCAGGTT
CGCGCCCAGG CCGACCGGCA GTACCGCATG GACAGGGAAG ACATCCTCGC CCTGAAGGTC
CGGTCGGCGA CCGGGGCGCT GGTTCCGCTT GGAACCTTGA TGGACATCCA GGATGCCAGC
GGCCCGGCGC TTGTCCAGCG CTACAACATG TATGTCTCGG TGCCGCTTCA GGGCAATCCG
ACGCCTGGAA CGTCAACGGG CGATGCCATC GCCAAGATGG AGGCCTTAGC GGCGAAAATC
CTGCCGCAGG GGACGACCTT CGAATGGACC GAGCTCGCCT ATCAGGAGAC CCACACCGGC
AACACCGCCA TCTACATCTT CGCCCTGTCT GTCGTCTTCG TCTTCCTGGC GCTGGCGGCG
CAATATGAAA GCTGGGTTCT GCCGCTCGCG ATCATTCTCA TCGTCCCGCT TGCGGTGCTC
GCGGCGCTGA TCGGGGTCTC GCTGAGGGGA ATGGACAACA ATGTCCTGAC GCAGATCGGC
CTGATCGTTC TGATCGGCCT TGCGGCCAAG AACGCCATTC TGATCGTCGA GTTCGCCAGG
CAGGCGGAGG ACGAGGGCAA ATCGCCGGTA GAGGCGGCCA TCGAGGCCAG CCATCTTCGC
CTGCGCCCGA TCCTGATGAC GGCATTCGCC TTCATTTTCG GTGTTCTGCC GCTCGCCATC
GCCACCGGCC CCGGCGCCGA AATGCGCCAG TCGCTCGGCA CCGCCGTCTT CTCGGGCATG
CTCGGCGTGA CGATCTTTGG CCTGTTTCTG ACGCCGGTCT TCTACGTCGT GCTGCGCGGC
TGGCGCCGCA AGCGGCCGGC CACTGTAGAG CCAGCGAAGA CGGAGCCGGT CGAGCAAGGG
GTCGTCTGA
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| Protein sequence | MRFAHFFVDR PIFAAVISIL FLVVGSIAYT QLPVSQYPEI APPTIVVRTS YPGADPQTIA
DTVSTPLEQQ INGVEDMLYM SSYSSADGAM SLTITFKLGT DLDKVQVLVQ NRVSIALPRL
PEEVQRLGVT TDKSSPDLMM VVHLLSPSHR YDQLYVSNYA RNRIRDVLVR LDGVGDVQIF
GERQYSMRIW LDPEKLSAYG MTSDDVVSAL RDQNVQVSGG KIGAPPVTGK NAFEYTVRTD
GRFSDVREFR YVIVKSTTSG RLVQLQDVAR IELGAQDYVT NSYLNNDPAV ALGIFARPGT
NALDTAHQVQ TLMKDISQNF PPGLEYRIVY DTTEFISDSI TEVYRTIAEA AILVAIVVLV
FLQSWRTAII PIIAIPVSLI GTFAVLLAFG FSLNMLTLFG LVLAIGIVVD DAIVVVENVE
RNLARGMTPK QASHVTMDEV GTAVVAISLV LIAVFVPTAF IPGISGQFYR QFAVTISVTT
AISALNSLTL SPALAGILLK AHDHETKRMN VASRLGRGLA DGFNHGFDRL SSGYSWTVRH
LVSSWVGLTA AMVTFVCLLG ATWYMGTKVP AGFIPTMDQG YAIIVIQLPD GASLARTDAV
VKQVGDIART VPGVGNAVQF AGFSGATFTN ASNAGVVFVP FKSFAEREEG GENANKIIGE
LYGKLQSIQE AFIIAIPPPS VRGVGNSGGF KMQISDLENA DMTRVLGLAR QMMGAAATTE
GLTGVFTTFS DASPQYFLAI DRDKARFLNV PIPNIFNALS INLGVAYVND FNAFGRVYQV
RAQADRQYRM DREDILALKV RSATGALVPL GTLMDIQDAS GPALVQRYNM YVSVPLQGNP
TPGTSTGDAI AKMEALAAKI LPQGTTFEWT ELAYQETHTG NTAIYIFALS VVFVFLALAA
QYESWVLPLA IILIVPLAVL AALIGVSLRG MDNNVLTQIG LIVLIGLAAK NAILIVEFAR
QAEDEGKSPV EAAIEASHLR LRPILMTAFA FIFGVLPLAI ATGPGAEMRQ SLGTAVFSGM
LGVTIFGLFL TPVFYVVLRG WRRKRPATVE PAKTEPVEQG VV
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