Gene Rleg_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3356 
Symbol 
ID8015789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3365927 
End bp3366829 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID644825915 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002977142 
Protein GI241206046 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0553918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AAGTCATCGT CATCACCGGC GCTTCCAGCG GTTTCGGCGC TCTCACCGCC 
CGCGCCCTCG CCAAGGCCGG CCATACCGTC TATGCCGGCA TGCGCGGCAC GGAAGGCCGC
AACGCTCCGG CCGTCGCCGA TGTGGCTGAA TTCGCCAGGA ACAACAACGT CGATCTGCGC
TCGGTCGAAC TCGATGTCGC CTCCGACGCG TCGGTTGTAT CAGGTATCGC CAGGATCATC
ACCGATGTAG GCCGCCTCGA TGTCATCATC CACAATGCCG GCCATATGTC CTTCGGCCCG
GCCGAAGCTT TCACGCCGGA ACAGTTCGCC GAGCTCTTCG ACATCAACGT GCTCTCCACC
CAACGCGTCA ACCGCGCGGC ACTTCCGTAT CTGCGCAAGC AGGGCAGGGG CCTGGTGGTC
TGGGTATCGT CGTCGAGCAG CCGCGGTGGC ACGCCTCCCT ACCTCTCGCC CTATTTCGCC
GCCAAGGCGG CGATGGATTC ACTTGCCGTC TCCTATGCCG GCGAGCTGAC CCGCTGGGGC
ATCGAGACCT CGATCATCGT GCCCGGCGCC TTCACCAAAG GCACCAACCA TTTCGCCCAT
TCCGGCTCGC CTGATGATAC GGCCCGCGCC GCCGAATACA ATGAAGGACC CTACAAGGGC
GTGCCGGAGC AGGCGCTGCA GGGCCTGGCA GCGCTCGAAC CTGCCGACGC CGATGCCGGC
GCGGTTGCCG TCGCCATCGT CGATGTCGTC GGCAAGCCCT TCGGCACCCG GCCGTTCCGC
GTCCACATCG ATCCGTCCGA GGACGGCGCC GAGATCGTCA ACGGCGTTGC CGACCGTGTC
CGGGCGGAAT TGTTCCGCCG CATCGGCCTC GAGGACTTGC TGAAGCCGGC CGTCGGGAAT
TGA
 
Protein sequence
MSKQVIVITG ASSGFGALTA RALAKAGHTV YAGMRGTEGR NAPAVADVAE FARNNNVDLR 
SVELDVASDA SVVSGIARII TDVGRLDVII HNAGHMSFGP AEAFTPEQFA ELFDINVLST
QRVNRAALPY LRKQGRGLVV WVSSSSSRGG TPPYLSPYFA AKAAMDSLAV SYAGELTRWG
IETSIIVPGA FTKGTNHFAH SGSPDDTARA AEYNEGPYKG VPEQALQGLA ALEPADADAG
AVAVAIVDVV GKPFGTRPFR VHIDPSEDGA EIVNGVADRV RAELFRRIGL EDLLKPAVGN