| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3352 |
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| Symbol | |
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| ID | 8014234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 3359198 |
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| End bp | 3362398 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644825911 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002977138 |
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| Protein GI | 241206042 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.176726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00729316 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACATAT CCAGATTCTT TGTCGACCGC CCGGTCTTTG CCGGTGTTCT TTCGGTCCTC
ATCCTGGTCG CCGGCCTGAT CGGCCTGCGC GCGCTGCCGA TTTCCGAATA TCCGGAGGTC
GTGCCGCCGT CGATCGTCGT GCGCGCCACC TATCCCGGCG CCAACCCAAG CGTCATCGCC
GAAACGGTGG CAACGCCGCT CGAAGAGCAG ATCAACGGCG TCGAAGGCAT GCTCTATATG
GCTAGCCAGG CGACATCGGA CGGCGTGCTC AACGTCACCG TCACCTTCAA GCTCGGCACC
GACCCTGATA AGGCGCAGCA GCTCGTGCAG AACCGCGTTT CGCAGGCCGA ACCGCGCCTG
CCGGCGGAAG TCCGTTCGCT CGGCATCACC ACAGTCAAGA GTTCGCCCAA CTTCATTATG
GTCGTCAACC TCGTCTCTGA CGGGAACAGT CACGACATCA CCTATCTCCG CAACTACGCG
ACCTTGAACG TCAAGGATCG GCTCGCCCGC ATTGCAGGCG TCGGTCAGGT GCAGGTCTTC
GGCGCCGGCG ACTATTCCAT GCGTGTCTGG ATCGACCCGC AGAAGGCCGC CGAGCACAAT
CTTGCCGCCA GCGACATCAG CAGCGCGATC AGCTCCCAGA ACATCCAGGC CGCCGCCGGT
ATCATCGGCG CATCGCCGAG CCAACCGGGT GTGGACCTGC AGCTCAACGT CAATGCCCAG
GGCCGCCTGC GCACGCCTGA GGAATTTGGC AACATCATCG TCAAGACGGG CGCCAGTGGC
GAGATCACCC GCCTTCGCGA TGTCGCCCGC ATCGAGCTCG GTGCTGCGGA CTACACCCTG
CGTTCGCTGC TTGACGGCAA GCCGGCCGTC GCAGTTGCTG TGCTGCAGGC GCCGGGTTCG
AACGCGATCG AGATCGCGGA CAATGTGAAC GCGACCATGG ATCAGTTGCA GCTCGCCATG
CCTGAGGGCG TCAAGTACGA GATCGTCTAC GATACGACGA AATTCGTGCG TGCCTCGATC
GAGAAGGTCA TCGACACGCT GCTCGAGGCC ATTGCGCTGG TCGTCCTCGT CGTCATCCTG
TTCCTGCAGA CGTGGCGCGC CTCGATCATC CCGCTGATCG CGGTTCCGGT ATCGATCATC
GGCACCTTCG CGGTGATGTA TGTCTTCGGC TTCTCGATCA ACGCGCTCAG TCTGTTCGGC
CTGGTGCTTG CGATCGGTAT CGTCGTCGAC GACGCGATCG TGGTGGTCGA AAACGTCGAG
CGCAATATCG AGCATGGCCT GTCGCCGCGG GCTGCCACCT ACAAGGCAAT GAAGGAAGTC
TCCGGTCCGA TCGTCGCGAT CGCGCTGGTC CTCGTCGCGG TCTTCGTGCC GCTTGCCTTC
ATCTCCGGCC TGTCGGGTCA GTTTTACCGC CAGTTCGCGC TGACGATCGC AATCTCGACC
GTCATCTCGG CCTTCAACTC ACTCACCCTG TCTCCGGCAC TGGCAGCCCT TCTCCTGAAG
GGCCATGATC AGCCGAAGGA TTGGCTGACG CGGTTCATGG ACGCCATCTT CGGCTGGTTC
TTCCGCGGCT TCAACCGTGT CTTCGGCGCG GGCTCGAATG CCTACGGCAA GGGCGTGGGC
GGGCTGTTGT CGCGCAAGAG CATCGTCATG GTGATCTATC TGGCACTGGT CGGTGCGACC
TACAGTCTCT TCAGTACTGT TCCCGGCGGC TTCGTGCCAT CGCAGGACAA GCAGTATCTG
ATCGGCTTCG CCCAGCTGCC GGATGCCGCA AGCCTCGACC GCACGGAAGA CGTCATCAAA
CGGATGACCG ACATCGCGCT GGCGCAGCCG GGCGTTGCCA ATGCGATCGC CTTCCCGGGC
CTGTCGATCA ATGGCTTCAC CAACTCCTCG AATGCAGGCA TCGTCTTCGT GACGCTGAAG
GACTTCGAGG AGCGCAAGAC GCCTGATCTC TCGGGCGGCG CAATCGCCAT GGCGCTGAAC
CAGAAGTTCG GCGTCATCCA GGATGCCTTC ATCGCCATGT TCCCGCCCCC GCCGGTCAAT
GGTCTCGGCA CGACCGGCGG CTTCAAGCTG CAGATCGAGG ATCGTGCCGG CCTCGGCAAC
CAGGCGCTCG ACGAAGCCAC GAAGGCCGTG CTTGCAAAGG CCTACCAGAC GCCTGAACTC
GCCGGGCTGT TCTCCAGCTT CCAGATCAAC GTGCCGCAGC TCTATGCCGA TCTCGACCGT
GCCAAGGCCG AGCAGCTCGG GGTTTCCGTC ACCGACGTCT TCCAGACGCT GCAGATCTAT
CTCGGTTCGC TCTATGTCAA CGACTTCAAC GCCTTCGGCC GCACCTACAG CGTCCGTGTG
CAGGCCGATG CGAAATTCCG CGCCCAGCCG GAAGATATCG GCCAGTTGAA GGTCCGTTCG
GCATCGGGTG AGATGATCCC ACTTTCGGCC CTTCTGAAGG TGGAGCCGAG CACCGGTCCG
GAACGCGCGA ACCGCTACAA CGGCTTCCTT GCCGCCGATA TCAACGGCGG TCCGGCACCG
GGCTTTTCGT CCGGCCAGGC GCAGGCGGCA ATCGAGAAGA TCCTTCACGA GACCCTGCCT
GCGGGCATCG ACTTCGAATG GACGGATCTG ACCTATCAGC AGATCCTGGC CGGCAATTCG
AGCATCGTCG TCTTCCCCCT GGCACTGTTG CTCGTCTTCC TCGTGTTGGC CGCCCAGTAT
GAAAGCCTGA CGCTGCCGCT TGCGATCATC ATGATCGTGC CGATGGGCGT GCTGGCCGCG
CTGACCGGCG TCTGGCTCAC CGGTGGAGAC AACAACATCT TCACCCAGAT CGGTCTTGTG
GTGCTTGTCG GTCTATCGGC GAAGAACGCG ATCCTGATCG TGGAATTCGC CCGCGAACTG
GAGTTCGAGG GAAGAACACC GCGGGAGGCC GCAATCGAGG CCAGCCGCCT TCGCCTTCGC
CCGATCCTCA TGACCTCCCT TGCCTTCATC ATGGGTGTCG TGCCGCTCGT CGTCTCTACA
GGCGCCGGCG CGGAAATGCG CGCGGCCATG GGTGTCGCGG TCTTCTCCGG CATGATCGGC
GTGACCTTCT TCGGCATCTT CATGACGCCG GTGTTCTACG TGCTGCTACG GCGGCTGACG
GGTAACCGTC CGCTCGTCCA GCACAAGCCG GACGAACACA AGGAAGAAGA GGCGGAGGTC
ATCCGGCTCG CGGCGGAATA A
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| Protein sequence | MNISRFFVDR PVFAGVLSVL ILVAGLIGLR ALPISEYPEV VPPSIVVRAT YPGANPSVIA
ETVATPLEEQ INGVEGMLYM ASQATSDGVL NVTVTFKLGT DPDKAQQLVQ NRVSQAEPRL
PAEVRSLGIT TVKSSPNFIM VVNLVSDGNS HDITYLRNYA TLNVKDRLAR IAGVGQVQVF
GAGDYSMRVW IDPQKAAEHN LAASDISSAI SSQNIQAAAG IIGASPSQPG VDLQLNVNAQ
GRLRTPEEFG NIIVKTGASG EITRLRDVAR IELGAADYTL RSLLDGKPAV AVAVLQAPGS
NAIEIADNVN ATMDQLQLAM PEGVKYEIVY DTTKFVRASI EKVIDTLLEA IALVVLVVIL
FLQTWRASII PLIAVPVSII GTFAVMYVFG FSINALSLFG LVLAIGIVVD DAIVVVENVE
RNIEHGLSPR AATYKAMKEV SGPIVAIALV LVAVFVPLAF ISGLSGQFYR QFALTIAIST
VISAFNSLTL SPALAALLLK GHDQPKDWLT RFMDAIFGWF FRGFNRVFGA GSNAYGKGVG
GLLSRKSIVM VIYLALVGAT YSLFSTVPGG FVPSQDKQYL IGFAQLPDAA SLDRTEDVIK
RMTDIALAQP GVANAIAFPG LSINGFTNSS NAGIVFVTLK DFEERKTPDL SGGAIAMALN
QKFGVIQDAF IAMFPPPPVN GLGTTGGFKL QIEDRAGLGN QALDEATKAV LAKAYQTPEL
AGLFSSFQIN VPQLYADLDR AKAEQLGVSV TDVFQTLQIY LGSLYVNDFN AFGRTYSVRV
QADAKFRAQP EDIGQLKVRS ASGEMIPLSA LLKVEPSTGP ERANRYNGFL AADINGGPAP
GFSSGQAQAA IEKILHETLP AGIDFEWTDL TYQQILAGNS SIVVFPLALL LVFLVLAAQY
ESLTLPLAII MIVPMGVLAA LTGVWLTGGD NNIFTQIGLV VLVGLSAKNA ILIVEFAREL
EFEGRTPREA AIEASRLRLR PILMTSLAFI MGVVPLVVST GAGAEMRAAM GVAVFSGMIG
VTFFGIFMTP VFYVLLRRLT GNRPLVQHKP DEHKEEEAEV IRLAAE
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