Gene Rleg_3320 details

Gene Information

• Locus tag: Rleg_3320
• ID: 8014204
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhizobium leguminosarum bv. trifolii WSM1325
• Kingdom: Bacteria
• Replicon accession: NC_012850
• Strand: +
• Start bp: 3322985
• End bp: 3326371
• Gene Length: 3387 bp
• Protein Length: 1128 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644825879
• Product: histidine kinase
• Protein accession: YP_002977106
• Protein GI: 241206010
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.515444
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAGCGC GCCAACGCAT CATTCCGGTA AGACGCGAAT ATAATCGCTG GGTCGCCAAC 
CAGACGCTGG AAGATTATGC GCTGCGCTTC ACTGCCAAGA GCGCCCGCCA TTTTTCCTCA 
CAGCGCATCT CACAGACGGC GATCGGCGCA ATCTCCTTCC TGGCGCTGGA GGCGATCGGC 
GGCGCGATCA CGCTTTCCTA CGGCACCACC AACGCCTTTT ACGCCATCAT CGTCGCCTCG 
ATCGCCATGC TGGCGATCGG CCTGCCGATA AGCCGCTACG CCATCCGCCA CGGCGTCGAC 
ATCGATCTTC TGACGCGCGG CGCGGGCTTC GGCTATATCG GCTCGACCAT CACCTCACTG 
ATCTATGCAA GCTTCACCTT CATGCTGTTT GCGATCGAGG CTTCGATCAT GTCCGGGGCG 
CTGGAGCTCA CCCTCGGCAT CCCGCTCTGG ATCGGCTACA TCATCAGTGC CGTCATGGTG 
ATCCCCCTGG TGACGCACGG CGTGCGGCTG ATCAGCAAGT TCCAGCTGAT GACCCAGCCC 
TTCTGGATCG TGCTGAATAT CCTGCCTTTC ATCTTCATCG CCTTGCTGGA TTGGGAAAAA 
TTCGATCTCT GGCGCGCCTT TGCCGGCATC CGTCATGCCT CCGGCCCGCC CGGCACCGTC 
GCCGAGTTCG ATCTCGTGGA GTTCGGCGCC GCCTCCGCCG TCATCCTGGC GCTGATGTCG 
CAGATCGGCG AACAGGCCGA CTTCCTGCGC TTCCTGCCGC CGGACCCGCA GCGCAAGTGG 
CGCCACCGCC TGGCGATCTT TCTCGCCGGC CCCGGCTGGG TCATCATCGG CGCGCCCAAG 
TTGCTTGCCG GTTCATTTCT GGTCGTGCTG ACCTTCACCT CGGGCGTCCC CCTCGATCGC 
GCCGCCGACC CGGCACAGAT GTATCTGACC GCCTTCGGCT ACATGGTCCC CTGGCACAAT 
GCCGCGTTGC TGTTGATGGC GGCCTTCGTC GTCGTCTCAC AGCTAAAGAT CAATGTGATG 
AACGCCTATG CAGGTTCGCT CGCCTGGTCG AACTTCTTCT CGCGGCTGAC CCACAGCCAT 
CCCGGCCGCG TCATCTGGCT GGTGTTCAAC GTCGCGATTG CCCTGCTTTT GATGGAACTC 
GGCATCTACC GGCTGCTGGA GGAGACGCTC GGCATCTTCT CGATCATCGC CATGGCCTGG 
CTCTGCACGA TCTCCGCCGA TCTCTTCATC AACAAGCCGC TGGGGCTGGC TCCCCCCGGC 
ATCGAGTTCA AGCGCGCGCA TCTCTACGAC ATCAACCCGG TCGGCCTCGG CGCCATGACG 
CTATCGGCGA CGGTGTCGCT GATTGCCCAT TTCGGTGCCT TCGGCGAGAT CGCCGCCTCG 
CTCGCTCCCT ATATTACCCT CGTCGTCGCG CTGGTCGCCT CGCCTGTCAT CGCCTGGGCA 
ACGAAAGGCA AGTTCTATCT CGCCCGCAAG CCGCGCCAGA GCTGGAAGAA CCTGACGAAC 
ATCACCTGCT CGGTCTGCGA GCATCCCTTC GAGCCGGAGG ATATGGCCTG GTGCCCGGCC 
TATGCCGCGC CGATCTGCTC GCTCTGCTGC TCGCTCGACA GCCGCTGCCA CGACATGTGC 
AAGCCGGCCG CCCGTTTCAA TGCGCAAGTC GGCACCGTCG CCAAGGTGCT GCTGTCTGAA 
ACCATCATCG AGAAGCTGAC GACGCGTCTC GGCCGCTACG GCATCGCCGT CGTGCTGGCA 
TTGACCGCCA TCGGCGCGAT CCTGGCGATG ATCGCCCATC AGGTCGCCTC CGCCTCCCCT 
GAGACGGCCG AGGTCGTCAA CCGCACCATC TTCATCGTCT TCTTCGTCTT CTCGGTGATC 
GCAGGCGTCG TCTGCTGGTT CTATGTGCTC GCCCATGACA GCCGCGTCGT TGCCGAGGAG 
GAATCCTCAC GCCAGAACAC GCTGCTGCTC AAGGAAATCG CCGCCCATAA GAAGACCGAC 
GCTGCCCTGC AGAACGCCAA GGAAACGGCC GAGGCCGCCA ACCGCGCCAA GAGCCGCTAT 
GTCGTCGGGC TCAGCCATGA ATTACGCACG CCGCTGAACG CCGTGCTCGG CTACGCCCAG 
ATCCTCGAAC GCGACGAGAC CATTCCGGCG CCGCGCCAGT CCTCGATCAA GGTCATCCGC 
CGCAGCGCCG AACACCTCTC CGGGCTGATC GACGGCCTGC TCGATATTTC CAAGATCGAA 
GCCGGCCGCC TGCAGGTCTA TTCCAACGAG ATCAACATCC AGGATTTCCT CGACCAGATC 
GTCGATATGT TCCGGCCACA GGCGCAGGCA AAGGGGCTCG CCTTCATCCA TGAGCGCGCG 
CCGGCCTTGC CGCAATTCGT CCGCACCGAC GAAAAGCGCC TGCGCCAGAT TCTCGTCAAC 
CTGCTCTCCA ATGCCATCAA GTTCACTGAC GAGGGCAGCG TCACCTTCGA TGTCGGCTAT 
CGCAGCCAGG TCGCGACCTT TACCGTCGCC GATACCGGCC GAGGCATCAC CGAGAAAGAC 
CTGCCCCGCA TCTACGAACC CTTCCAGCGC GGCGAGGCCG AAAGCGTGCG GCCAATGCCG 
GGGCTCGGCC TCGGCCTCAC CATCACCCGG CTTCTGACCA ACACGCTCGG CGGCGAGATC 
TCGGTTTCAA GCGTGAAGGA GGAAGGCTCG ACCTTCCGCG TCCGGCTGAT GCTGTCCGCC 
GTCATGCGCG CAGTGGCCGC AGCGCCGCAG GAGAAGCGCA TCGTCGGTTA TGACGGCCCG 
CGCCGCACGA TCGTCGTCGT CGATGATAAC GAGGACCACC GCGAGATGAT GCGCGAGATC 
CTGGCGCCGC TCGATTTCAT CGTGCTGACG GCGGCAGGCG GCGGCGAATG CCTGACGCTG 
ATCGAGGGCA TCATGCCGGA CCTTTTCCTC GTCGATATCC TGATGCCCGG CATGAACGGC 
TGGCAGCTCG TCTCGCGTCT GCGCGAGGCC GGACAGACAG CGCCAGTGCT GATGCTGTCG 
GCCAATATCG GTGATGCGGC CGTTCTCAGC GACAGTGACG ACAGCCACAA TGATGCGATC 
GGCAAGCCGG TCGACATCCG CCAGCTGCGC GACAAGCTCG CCCTGCATCT CGGCCTGACA 
TGGATCTATG CCGATGCCAT GCCAACCGTC CCTGTCAAGA TCGAAGCGCC GATGCTGAGC 
CCAGGTGCTG CCCATGTGCA GGAATTGCTG CGGCTCGGCG AGATCGGCTA TATCAGAGGC 
ATCGAAGCCA AGCTTTCGGA CCTTGCCAAG GTGGAGGCAA ATCAGCCATT CACGGAGGAA 
CTTCGCGCCT ATGTCGCCGC CTTCGATCTC GCCGGCTTCA TGACCTTCCT GCACGACTTC 
GACGAAAAGG TGGAATCCAT TGGCTGA 

 

Protein sequence

MAARQRIIPV RREYNRWVAN QTLEDYALRF TAKSARHFSS QRISQTAIGA ISFLALEAIG 
GAITLSYGTT NAFYAIIVAS IAMLAIGLPI SRYAIRHGVD IDLLTRGAGF GYIGSTITSL 
IYASFTFMLF AIEASIMSGA LELTLGIPLW IGYIISAVMV IPLVTHGVRL ISKFQLMTQP 
FWIVLNILPF IFIALLDWEK FDLWRAFAGI RHASGPPGTV AEFDLVEFGA ASAVILALMS 
QIGEQADFLR FLPPDPQRKW RHRLAIFLAG PGWVIIGAPK LLAGSFLVVL TFTSGVPLDR 
AADPAQMYLT AFGYMVPWHN AALLLMAAFV VVSQLKINVM NAYAGSLAWS NFFSRLTHSH 
PGRVIWLVFN VAIALLLMEL GIYRLLEETL GIFSIIAMAW LCTISADLFI NKPLGLAPPG 
IEFKRAHLYD INPVGLGAMT LSATVSLIAH FGAFGEIAAS LAPYITLVVA LVASPVIAWA 
TKGKFYLARK PRQSWKNLTN ITCSVCEHPF EPEDMAWCPA YAAPICSLCC SLDSRCHDMC 
KPAARFNAQV GTVAKVLLSE TIIEKLTTRL GRYGIAVVLA LTAIGAILAM IAHQVASASP 
ETAEVVNRTI FIVFFVFSVI AGVVCWFYVL AHDSRVVAEE ESSRQNTLLL KEIAAHKKTD 
AALQNAKETA EAANRAKSRY VVGLSHELRT PLNAVLGYAQ ILERDETIPA PRQSSIKVIR 
RSAEHLSGLI DGLLDISKIE AGRLQVYSNE INIQDFLDQI VDMFRPQAQA KGLAFIHERA 
PALPQFVRTD EKRLRQILVN LLSNAIKFTD EGSVTFDVGY RSQVATFTVA DTGRGITEKD 
LPRIYEPFQR GEAESVRPMP GLGLGLTITR LLTNTLGGEI SVSSVKEEGS TFRVRLMLSA 
VMRAVAAAPQ EKRIVGYDGP RRTIVVVDDN EDHREMMREI LAPLDFIVLT AAGGGECLTL 
IEGIMPDLFL VDILMPGMNG WQLVSRLREA GQTAPVLMLS ANIGDAAVLS DSDDSHNDAI 
GKPVDIRQLR DKLALHLGLT WIYADAMPTV PVKIEAPMLS PGAAHVQELL RLGEIGYIRG 
IEAKLSDLAK VEANQPFTEE LRAYVAAFDL AGFMTFLHDF DEKVESIG