| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3226 |
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| Symbol | |
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| ID | 8014119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 3228018 |
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| End bp | 3229784 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644825787 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_002977014 |
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| Protein GI | 241205918 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCAGA GTTCAGCAGC TGATGTCAGC GAGCCATCCA AAGCATTGAG GAAATGCAAG
GGGGGACTTG TCTTCATTGG AATAGCAAGC GCGCTTATCA ATATCCTCTA TCTTACAAGT
TCATTTTTTA TGCTTGAGGT GTATGACCGG GTCATCCCCA GCAAAAGCAT ACCCTCGCTG
GCGGTCCTGG CAATACTTGC ATTAATGCTT TACGTCTTCC AAGGAGCGTT CGAGGTTCTG
CGAAGCAGGA TGCTCGTGCG TGTTGCCGGC GCGCTTGACG AGATGGTAAA CGGACGTGTG
TTCCGGGCGC TGATCAAGGC TCCGTTGAAG GTCAAGATCG GCGGCGACGG GCTTCAGCCG
CTGCGCGACT TCGACCAGAT CAGAACCTTC CTGTCCGGCA TGGGCCCGAC GGCGATGTTC
GATCTGCCCT GGTTGCCGTT TTATATCGTG ATCTGCTTCC TCTTTCATCC GGCGATCGGA
TATATCGCGA TCGGTGGATC GCTGGTTCTC GCCATTCTGA CCTTCCTGAC CAATCAGGGA
ACGCGTACGC TCTCAAAAAA GCAGTCTGAC TCCGCCAATA TGCGAAATGC CTTTGCGCAG
ACCTCGATCC GCAATTCCGA GGTCATTCAC GCCATGGGCA TGGCGGGTAC GATGGCCGAG
ATCTGGGACC GCAAGAACAG TGAATACCGG ACGATCACCC GGCAGGCATC GGATGTCGGC
AATGGGTATG CCACCTTGTC GAAGATTTTC CGTATTGCTT TGCAATCGGG AACGCTCGCG
ACCGGCGCAA TTCTGGTCAT CCAAGGACAG GCTTCTTCGG GAATTATCAT CGCCGGCTCG
ATATTGACCT CTCGCGCCCT GGCGCCTGTC GAAGCGGCGA TCGGAAATTG GCGTGGTTTC
GTTTCTGCCC AGCAGAGTTG GGCGCGGCTT TCGAGCCTGC TGAAAACCAT TCCTGAGATT
CCAGCCCCCC TTGCGCTCGC GGCTCCCACC AAGCAAGTCA CCGTCGAGGG CTTGGCAAGC
GGACCGCCAG CGGGCCAGCG CCTGGTCATC TCCGATGTCA GCTTCGGCTT ACGGGCAGGG
AGCGCGCTTG GGGTCATTGG TTACAGTGCC TCGGGTAAGT CGTCGCTGGC GCGGGCGATG
ATGGGCATCT GGCCGACAGT CAGAGGATCC ATTCGCCTCG ATGGCGCGGC ACTCGACCAG
TGGGACGGTG ACGCACTTGG CCGGCATATT GGTTATCTCC CGCAGGATGT GGAGCTTTTC
TCGGGGACCG TCGCGCAGAA TATCTGCCGT TTCGCGAAGG AAATGTCGCC AGAGACGGTG
GTTGCCGCAG CGAGGGCGGC GCGTGTTCAC GATCTCATTC TTCGTCTGCC GAACGGTTAT
GAAACCGAAA TCGGCGAAGG TGGTGCCGCG CTTTCAGCCG GCCAGAGGCA GCGTATCGCG
CTTGCAAGAG CGCTTTACGG CGAACCATTC CTCGTCGTGC TCGACGAACC GAACTCCAAT
CTCGACGAGG AAGGCGAGCG GGCGCTGAGT GCCGCGATCA TGAGCGTGCG TGCACGCGGC
GGCATTGTCG TTGTCATCGC ACATCGGTCC GGCGTTCTGG CGGTCTGCGA CTTCGTGCTG
ATGATGCAGG ATGGCCGCAT GATCGCGTTC GGTCCCAAAG AGGAAGTTCT CGCAAGGGTC
AGCCGGCCGG AAGCGGCGCG CACGCCGATT GCCGAGCGCG TGGCTCAGCT TAAAGTCGTG
GTCGACGGCA TGAATGCGGC CGAATAG
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| Protein sequence | MFQSSAADVS EPSKALRKCK GGLVFIGIAS ALINILYLTS SFFMLEVYDR VIPSKSIPSL
AVLAILALML YVFQGAFEVL RSRMLVRVAG ALDEMVNGRV FRALIKAPLK VKIGGDGLQP
LRDFDQIRTF LSGMGPTAMF DLPWLPFYIV ICFLFHPAIG YIAIGGSLVL AILTFLTNQG
TRTLSKKQSD SANMRNAFAQ TSIRNSEVIH AMGMAGTMAE IWDRKNSEYR TITRQASDVG
NGYATLSKIF RIALQSGTLA TGAILVIQGQ ASSGIIIAGS ILTSRALAPV EAAIGNWRGF
VSAQQSWARL SSLLKTIPEI PAPLALAAPT KQVTVEGLAS GPPAGQRLVI SDVSFGLRAG
SALGVIGYSA SGKSSLARAM MGIWPTVRGS IRLDGAALDQ WDGDALGRHI GYLPQDVELF
SGTVAQNICR FAKEMSPETV VAAARAARVH DLILRLPNGY ETEIGEGGAA LSAGQRQRIA
LARALYGEPF LVVLDEPNSN LDEEGERALS AAIMSVRARG GIVVVIAHRS GVLAVCDFVL
MMQDGRMIAF GPKEEVLARV SRPEAARTPI AERVAQLKVV VDGMNAAE
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