Gene Rleg_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3161 
Symbol 
ID8014062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3160241 
End bp3161188 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content60% 
IMG OID644825727 
Productdihydrodipicolinate synthetase 
Protein accessionYP_002976955 
Protein GI241205859 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0466092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGA TGGATATGCG CGGGCTGAGC CCGGCCCCCG TTACCGCTTT CACCCGCGAC 
GGTGAAGTTG ATCACAAAGC CAACGCCAAA CTCGCCAAAT GGCTAGTTTC GATGGAAGGC
GTCAAAAGCC TCGTCATCCT CGGCCATGCC GGCGAAGGCA CCTTCCTCAC GGAAGAGGAG
CGCCTTGCTC TCATCCGCAC CTATGTCGAA GCTGTCGACG GTGCCGTTCC GATCATTGCC
GGGATTACCG GTGAAGGCAC GAAGGTCGCC GCTGAAGAGG CGAGGAAATG CAAGGCTGCG
GGTGCCACCG GCGCACTCGT CTATCCGAAC CACGGCTGGC TGCGTTTCGG CTTTCAGAAG
GGAGCGCCCC AGGATCGCTA CAAGGCAATC TGGCAGGAGT CTGGCCTCCA GTGCATCCTG
TTCCAGTATC CCGACGCCAC CAAAGCATCA TACGATCTCG AAACACAGCT TGCGATTGCC
ACACAGGAAG GCGTCGTCGC CACCAAGAAC GGCGTGCGCA ATATGAAGCG CTGGTATGTC
GAAATTCCAG AGCTGAAGAA GGCCAATCCA AAGCTGCAGG TTCTGAGCTG CCACGATGAA
TGGCTGCTGC CGACCATGTT CGATGTCGAC GGTCTGCTCG TCGGTTATGG CAATATTGCG
CCGGAGCTGC TCATCGACCT GATCAAAGCC GGCAAGGCGC AGGACTATCC GGAAGCGCGC
AAGATCTTCG AGCGCCTTCT TCCGGTGACG CGTGCCGTCT ATCACCGCGG CTCTCACATG
GAAGGCACCG TGGCCCTGAA ACTTGGACTC GTGCACCGCG GTATCCTTGA CCACGCTACG
ATCCGCGAGC CGCTGAAGAA CCTTGGCGAA AAGGCCGAAG CAGAGATCTT CGCCGCCTTC
GACGCCGCCG GAATTGGCCG CGTTGACCAG TTGCTGGCTG CCGAGTGA
 
Protein sequence
MQPMDMRGLS PAPVTAFTRD GEVDHKANAK LAKWLVSMEG VKSLVILGHA GEGTFLTEEE 
RLALIRTYVE AVDGAVPIIA GITGEGTKVA AEEARKCKAA GATGALVYPN HGWLRFGFQK
GAPQDRYKAI WQESGLQCIL FQYPDATKAS YDLETQLAIA TQEGVVATKN GVRNMKRWYV
EIPELKKANP KLQVLSCHDE WLLPTMFDVD GLLVGYGNIA PELLIDLIKA GKAQDYPEAR
KIFERLLPVT RAVYHRGSHM EGTVALKLGL VHRGILDHAT IREPLKNLGE KAEAEIFAAF
DAAGIGRVDQ LLAAE