| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3092 |
|---|
| Symbol | |
|---|
| ID | 8015760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3089784 |
|---|
| End bp | 3090740 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644825659 |
|---|
| Product | choline ABC transporter, periplasmic binding protein |
|---|
| Protein accession | YP_002976887 |
|---|
| Protein GI | 241205791 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA CAAGCACGTT CAAACTCGTT ACCGCAACTG CCGTCGCCGC CCTCTCCGTT
GCGACCGCCG CCTTCGCCGC CGATCCCGAC AGCTGCTCCA CCGTTCATTT CTCGGACGTC
GGCTGGACGG ATATCACCGC CACCACCGCC ACCGCATCCA TCGTCCTGAA GAGCATCGGC
TATCAGACCG ACGTCAAGGT TCTCTCCGTG CCGGTCACCT ACACCTCGCT GAAGAACAAG
GACATCGACG TCTTCCTCGG CAACTGGATG GAGACGCAGG AGAAGGACGT TCGTCCCTAT
CTCGACGACA AGTCGGTCGA ATCCTTCGGC CCGAACCTGG TCGGCGCCAA GTACACGCTC
GCCACCAACG CCAAGGGTGC GGAACTCGGC ATCAAGGACT TCAAGGATAT CGCCGCCCAC
AAGGACGATC TCGACGGCAA GATCTACGGC ATCGAGCCCG GCAATGACGG CAACCGCCTC
GTCATGGACA TGATCGAGAA GAACGAGTTC GACTTGAAGG ATATGGAAGT CGTCGAATCC
TCCGAACAGG GCATGCTCGC CCAGGTCGCG CGTGCCGACA AGTCAGGCAA GCCCGTTGTT
TTCCTCGGCT GGGAGCCCCA CCCGATGAAC ACCAACTTCA AGCTGACCTA CCTCACAGGC
GGGGACAAAG TGTTCGGCCC CGACTTCGGC GGCGCCAAGG TCTTCACCAA CGTGCGTGCC
GGTTATCTCG ACGAATGCCC GAATGTCGGC ATGATGTTGA AGAACCTGAA ATTCTCCCTC
GACATGGAGA ACCAGATCAT GGGCAAGATC CTCAACGACG GCAAGGAGCC GGAGGCTGCA
GCTTCCGAAT GGCTGAAGGC GAACCCCGCA GCGCTCGAAC CCTGGCTCGC GGGCGTCAAA
ACCCGCGACG GCAGCGGCGA GGCTCTCGCG GCCGCCAAGA CCGGCCTCGG CCTCTGA
|
|---|
| Protein sequence | MKTTSTFKLV TATAVAALSV ATAAFAADPD SCSTVHFSDV GWTDITATTA TASIVLKSIG
YQTDVKVLSV PVTYTSLKNK DIDVFLGNWM ETQEKDVRPY LDDKSVESFG PNLVGAKYTL
ATNAKGAELG IKDFKDIAAH KDDLDGKIYG IEPGNDGNRL VMDMIEKNEF DLKDMEVVES
SEQGMLAQVA RADKSGKPVV FLGWEPHPMN TNFKLTYLTG GDKVFGPDFG GAKVFTNVRA
GYLDECPNVG MMLKNLKFSL DMENQIMGKI LNDGKEPEAA ASEWLKANPA ALEPWLAGVK
TRDGSGEALA AAKTGLGL
|
|---|
| |