Gene Rleg_3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3054 
Symbol 
ID8013966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3049845 
End bp3050495 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content61% 
IMG OID644825622 
ProductNUDIX hydrolase 
Protein accessionYP_002976850 
Protein GI241205754 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0331862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATG CGATTACCCA ACGTTATCCG CTGTTTTCCG CAGCCGAATT CCGCCGCCGC 
GCGCTCAACC AGAATGGTGG GCCGGTCGAT CATGCCTGGC GCGATCACGG GGACCACATC
CTCAATCCCG ATATCGTCGC CGAGGTCGAG ACCTTCAAGC TGCGCGACGC CGCCGTGCTC
GTACCCGTCA TCGACGATGG CGAGGAAGCG CATGTGATCT TCACCAAGCG CACGGCGACG
CTGCGCAAAC ATTCCGGGCA GATCGCCTTT CCCGGCGGCT CGATCGATCC CGCCGATATC
TCGCCCGAAA TGGCGGCGAT CCGCGAGACG GAGGAGGAGA TTGGCCTGGC CGGTTCCTTC
GTCGAAACCG TGGGGCGGCT GCCGAATTAC CTTGCCTCAA CGGGCTTCCG CATTACGCCG
GTGCTCGGCG TCGTCTCGCC GGGCTTTGCG CTGACGCTGA ACCCGACCGA GGTGGACGAC
GTGTTCGAGG TGCCGCTTTC CTTCCTGATG GATCCTGCCA ATCACACCCG CGACAGACGT
GTCATCGACG GCATCGACCG GCATTTCTAC CGCGTGCCCT ATGAAACCAG AATGATCTGG
GGAATTACCG CTGGCATCGT CCGCACGCTT TATGAAAGGC TTTATGCATG A
 
Protein sequence
MNDAITQRYP LFSAAEFRRR ALNQNGGPVD HAWRDHGDHI LNPDIVAEVE TFKLRDAAVL 
VPVIDDGEEA HVIFTKRTAT LRKHSGQIAF PGGSIDPADI SPEMAAIRET EEEIGLAGSF
VETVGRLPNY LASTGFRITP VLGVVSPGFA LTLNPTEVDD VFEVPLSFLM DPANHTRDRR
VIDGIDRHFY RVPYETRMIW GITAGIVRTL YERLYA