Gene Rleg_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2968 
Symbol 
ID8013891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2960313 
End bp2961557 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content64% 
IMG OID644825538 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002976766 
Protein GI241205670 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0277943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACC CGAAATTCGT TCGCCGCGGC CTTTTCCTGG TCTTCATCAT CCTTTTCCTC 
GACATTATCG GCATCGCCAT CATCATGCCG GTGCTGCCCG CCTATCTGGA GCAGCTGACC
GGTGGCAGCG TCAGCGATGC GGCGATCGAC GGCGGCTGGC TGATGCTGGT CTATGCCGGC
ATGCAATTCC TGTTCGCGCC GCTGCTCGGA AACCTGTCCG ACCGTTTCGG CCGCCGGCCG
ATCCTTTTGC TTTCGGTGCT AACCTTCGCG ATCGATAATT TCATCTGCGG CATCGCCACC
AGCTTCTGGA TGCTGTTCGT CGGCCGTGTG CTTGCCGGCA TCAGCGGCGG CAGTTTCGCC
ACCTGCTCAG CCTATATTGC CGATATCAGC ACGGAGGAGA ACCGGGCGAA GAATTTCGGG
CTGATCGGTA TCGCCTTCGG CGTCGGTTTC ACCATCGGCC CTGTCGTCGG CGGTGTCCTC
GGCGAATTCG GCCCGCGTGT GCCATTCCTC GGCGCGGCCG CGCTATCGCT TGTCAATTTC
ATCGCCGCCT GCTTCCTGCT GCCGGAGACG CTGGAGGCGA AGAACCGCCG CCGGTTCGAG
TGGAAACGCG CCAACCCGCT CGGCGCTTTG CGCCAGATGC GCCATTATCC CGGCATCGGC
TGGGTCAGCC TCGTTATGTT TCTGTTCTTC CTGGCGCATG CCGTCTATCC CTCGGTCTGG
GCGTTCGTCT CGACCTATCG CTACGGCTGG AGCGAGGGGC AGATTGGCCT GTCGCTCGGC
ATTTATGGCA TCGGCGCCGC GCTCGTCATG GGGCTGGTCC TGCCGCGGAT CGTGCCGGTG
CTCGGCGAGT GGAAAACCGC TCTTCTCGGT CTCTGCTTTT CAGCTGCAGG ATTGACCGGC
TATGCCTTCG CCTGGGAGGG CTGGGTGGTT TACGTCGTCA TCGTCGCGAC CGTCATCGAA
AACGTCGCCG ACCCGCCGCT GCGCAGCATC GCCGCCGGCA TGGTGCCGCC TTCGGCGCAG
GGTGAGCTGC AGGGCGCGCT TACCAGCCTC AGCAGCATCA CCACCATTGT CGGGCCGCTG
ATCTTCACCC AGATGTTTTC CTATTTCACG CGGCCTGAGG CGCCTGTCAC TTTTGCCGGC
GCACCCTATC TTGCCGCCGC GCTGTTCATC CTGGTGGCCG CCGGTGTGTT CCTGCTGCGG
GTCCGGGCCC GTGAGCCGGC CGAGGCGCTG GAAGCGGCCG GTTGA
 
Protein sequence
MLDPKFVRRG LFLVFIILFL DIIGIAIIMP VLPAYLEQLT GGSVSDAAID GGWLMLVYAG 
MQFLFAPLLG NLSDRFGRRP ILLLSVLTFA IDNFICGIAT SFWMLFVGRV LAGISGGSFA
TCSAYIADIS TEENRAKNFG LIGIAFGVGF TIGPVVGGVL GEFGPRVPFL GAAALSLVNF
IAACFLLPET LEAKNRRRFE WKRANPLGAL RQMRHYPGIG WVSLVMFLFF LAHAVYPSVW
AFVSTYRYGW SEGQIGLSLG IYGIGAALVM GLVLPRIVPV LGEWKTALLG LCFSAAGLTG
YAFAWEGWVV YVVIVATVIE NVADPPLRSI AAGMVPPSAQ GELQGALTSL SSITTIVGPL
IFTQMFSYFT RPEAPVTFAG APYLAAALFI LVAAGVFLLR VRAREPAEAL EAAG