| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2856 |
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| Symbol | murD |
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| ID | 8013792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 2846468 |
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| End bp | 2847880 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644825426 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_002976655 |
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| Protein GI | 241205559 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00477347 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCCGG TCACGACGCT CAAGGACAGG AAGGTCGCGC TCTTCGGGCT CGGCGGCTCC
GGCTTTGCCA CCGCCCGGGC GCTGGTATCA GGTGGTGTCG AGGTGACCGC CTGGGACGAC
AATCCCGACA GTGTCGCCAA GGCCGCTGCC GAAGGCATCA GGACGGAGGA CCTGCACAGC
ATCGACTGGA GCCAGCAGGC GCTGTTCGTG CTGTCGCCCG GCGTGCCGCT CACCCATCCG
AAGCCGCACT GGACTGTCGA TCTTGCCCGC GCGGCCGGCG TCGATATCGT CGGCGATGTC
GAGCTCTTCG TACGCGAGCG CCGCGCCCAT GCGCCGGATT GCCCTTTCAT CGCCATAACC
GGCACCAACG GCAAGTCGAC CACGACGGCG CTGATCGCCC ATATCTTGAA ATCCGCCGGC
TACGACACGC AGCTCGGCGG CAATATCGGT ACGGCCGTGC TGACGCTCGA TCCGCCGAAG
GCCGAGCGTT ATTACGTCGT CGAATGCTCC TCCTACCAGA TCGATCTGGC GCCGACGCTG
GACCCGTCGG CCGGCATCCT GCTCAACCTG ACGCCCGATC ATCTCGATCG TCACGGCACG
ATGCAGCATT ATGCCGATGT CAAGGAACGG CTGGTCGCCG GTAGCGATGT TGCAATCGTC
GGCATCGACG ACAGCCATTC GGCGCTGATT GCCGACCGCG TCGAGCGGGC GGGCGTCAAG
GTGGTCCGCA TCTCGCGCCG CAACGTCGTG GCCGACGGGA TTTATGCCGA GGGCACCAGG
CTCATCAAAG CTGCCGGCGG CGCGATGCTG CCTTTCGTCG ATCTCGACGG CATCCAGACG
CTGCGCGGCA GCCACAATGC GCAGAACGCC GCCGCAGCCG TCGCTGCCTG CCTTGCCGTC
GGCGTGTCGG CCGATGACAT CCGCGCCGGC TTTGCCTCGT TCCCCGGCCT CAAGCACCGC
ATGCAGCCGG TCGGGCAGCG TGGCCGTGTC GTTTTCGTCA ACGATTCCAA GGCGACCAAT
GCCGATGCCG CGGCGCCGGC CCTTTCGAGT TATGATCGCA TCTACTGGAT CGCCGGCGGC
CTGCCGAAGG CTGGCGGCAT CACGACGCTC GCTCCCTATT TTCCGCGCAT CGCCAAGGCC
TATCTGATCG GCGAGGCGGC GGCGGAATTC GCCGCGACGC TCGGCGAGGC TGTTCCTTAC
GAAATATCGG ATACGCTGGA GCGCGCCGTC GCGCATGCGG CCGCCGATGC CGAACGCGAC
GAGAGCGCCG CTTCGGCCGT GATGTTATCC CCGGCTTGCG CAAGCTTCGA CCAGTATAAG
AATTTCGAAG TCAGGGGCGA AGCCTTCGTC GGCCACGTGG CAGCGCTTGA CGGGATTGCG
ATGCTGATCG GTCCGGCAAC AGGAGAGAAA TGA
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| Protein sequence | MIPVTTLKDR KVALFGLGGS GFATARALVS GGVEVTAWDD NPDSVAKAAA EGIRTEDLHS
IDWSQQALFV LSPGVPLTHP KPHWTVDLAR AAGVDIVGDV ELFVRERRAH APDCPFIAIT
GTNGKSTTTA LIAHILKSAG YDTQLGGNIG TAVLTLDPPK AERYYVVECS SYQIDLAPTL
DPSAGILLNL TPDHLDRHGT MQHYADVKER LVAGSDVAIV GIDDSHSALI ADRVERAGVK
VVRISRRNVV ADGIYAEGTR LIKAAGGAML PFVDLDGIQT LRGSHNAQNA AAAVAACLAV
GVSADDIRAG FASFPGLKHR MQPVGQRGRV VFVNDSKATN ADAAAPALSS YDRIYWIAGG
LPKAGGITTL APYFPRIAKA YLIGEAAAEF AATLGEAVPY EISDTLERAV AHAAADAERD
ESAASAVMLS PACASFDQYK NFEVRGEAFV GHVAALDGIA MLIGPATGEK
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