Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2497 |
Symbol | |
ID | 8013470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2497512 |
End bp | 2499302 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644825077 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_002976307 |
Protein GI | 241205211 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0866572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGTAC CCATTGAGGA CTACGCGCTC ATCGGCGATT GCGAAACCGC CGCACTCGTC TCGAAGAACG GCTCGATCGA CTGGCTCTGT TTTCCGCGCT TCGATTCCCC CGCCTGTTTT GCCGCCCTGC TCGGCGCCGA GGATAACGGC TTCTGGTCGC TGTCACCGTC AGGTGAAAAT GTCCGCGTCA CGCGCCGCTA CCGCAACGAC ACGCTCATTC TCGAAACCGA GTTTCAGACC GAGACCGGCA CCGCCGTTCT CATCGACTTC ATGCCGCTTC GCGATGGCAC GAGCGATCTG ATGCGCATCG TCGAGGGCAA GAGCGGCACT GTCGCCTTCG ATATGGAGCT CAACCTTCGC TTCGATTACG GCCGAACCGT TCCCTGGGTC ACGCATGGCG AGGATGGCGG CATCACCGCC ATTGCCGGCC CGGACAGGCT AACCATGAAT TGCGCCGTCC CGCTCGAAGG CCGCGGCCTG AGCACGGTCG GCTCCTTCCA GGTTGCCGCT GGCGAGAGCC AGATCTTCAC CCTGACCTGG TCCCCCTCGC ATATGCCGCA GCCGGCTCAG CGGCAGGTGG AATATGCGCT GCCGGACACG GAGGAATTCT GGCAATCCTT TGCCGCGAAA TGCCCGAAAG TGGGCCGGTG GACGGAACAG GTCAAACGCT CGCTCATCAC GCTCAAGGCA CTGACCTACA TGCCGACGGG CGGCATAGTC GCCGCGGCGA CAACCTCCCT GCCGGAAAAG ATCGGCGGGC CGCGCAACTG GGACTACCGC TATTGCTGGC TGCGCGACGC GACGCTGACC CTGCTCGCCC TGATGAAACT CGGCTATTAC GAGGAAGCCA GTGCCTGGCG CAGCTGGCTG CTGCGCGCGG TCGCCGGCGC CCCGGCGCAG ATGCAGATCA TGTATGGCGT CGCCGGCGAG CGCAATCTGC TGGAATGGCA GGTTCCCTGG CTGAGTGGCT ACGAGGGCTC GACACCCGTA CGCATCGGCA ATGCCGCTGC CGAACAGGTG CAGCTCGATG TCTATGGCGA GGTGGCCGAC GCCCTGCTGC AGGCCCGCAA GGGCGGGCTT CCGCCGCATC ACCGCGGACG CGAACTGGCG GCGGCCATTC TGCCCTTTCT CGAAAAAATC TGGATGGAGC CCGATGAAGG CATCTGGGAG GTGCGCGGCC AGCGCCAGCA TTTCACCTAT TCGAAGGTCA TGGCCTGGGT GGCCTTCGAC CGCGCCGTCC AGATTGCCGA GGCGGACGGC GAGCCCGAGG CCGCCGTACG TTGGCGCACG CTCGCAGATC ACATCCATGC CGAGGTTTGC GAGAAGGCTT TCGATCCCGA ACTCGGCTGT TTCGTGCAGG CCTACGGCTC CAAGGCGCTT GATGCCAGCC TGCTGCATCT CGGCATGGTC GGCTTCATCC CGCCTGATGA TCCGCGCTAT GTCGCGACAG TCGAGGCGAT CGAGCGCAGG CTGCTGCGCG ATGGCCTGCT GCTGCGCTAC GAGACGCAGG AGGTGGACGA CGGCCTGCCG CCAGGCGAAG GCGCGTTCCT CGCCTGCAGC TTCTGGCTCG TCGACGCCCT CGGCATGATC GGCCGCCGCG ACGATGCGCT GCGCCTGTTC GAGCGGCTGC TTTCTATCTG CAACGATGTC GGGCTTCTGG CGGAAGAATA TGATCCCGCC GCCCGCCGCA TGCTCGGCAA CTTCCCGCAG GCCTTCAGCC ATGTCGGGTT GATCAACAGT GCGTTGAACC TCGCGCGGCT GGAGGGGCCG GCGGACCAGC GTTCGGCGTG A
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Protein sequence | MSVPIEDYAL IGDCETAALV SKNGSIDWLC FPRFDSPACF AALLGAEDNG FWSLSPSGEN VRVTRRYRND TLILETEFQT ETGTAVLIDF MPLRDGTSDL MRIVEGKSGT VAFDMELNLR FDYGRTVPWV THGEDGGITA IAGPDRLTMN CAVPLEGRGL STVGSFQVAA GESQIFTLTW SPSHMPQPAQ RQVEYALPDT EEFWQSFAAK CPKVGRWTEQ VKRSLITLKA LTYMPTGGIV AAATTSLPEK IGGPRNWDYR YCWLRDATLT LLALMKLGYY EEASAWRSWL LRAVAGAPAQ MQIMYGVAGE RNLLEWQVPW LSGYEGSTPV RIGNAAAEQV QLDVYGEVAD ALLQARKGGL PPHHRGRELA AAILPFLEKI WMEPDEGIWE VRGQRQHFTY SKVMAWVAFD RAVQIAEADG EPEAAVRWRT LADHIHAEVC EKAFDPELGC FVQAYGSKAL DASLLHLGMV GFIPPDDPRY VATVEAIERR LLRDGLLLRY ETQEVDDGLP PGEGAFLACS FWLVDALGMI GRRDDALRLF ERLLSICNDV GLLAEEYDPA ARRMLGNFPQ AFSHVGLINS ALNLARLEGP ADQRSA
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