Gene Rleg_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2396 
Symbol 
ID8013381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2397197 
End bp2398225 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content64% 
IMG OID644824977 
Productputative transmembrane protein 
Protein accessionYP_002976207 
Protein GI241205111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.296923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00231835 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCCGCTG AGAGGAGCCT CGCGGTCGAG GAGCAGAAAC GCAAAGGGCT GCGGGTTGCG 
TTCGCGGTCT CGATCGGCTT CACGCTCGCA GTCTATGCGG GGGCCATTGT GCCCTTCCTC
GGTCCGCTCT TTGCCGCCCA GTTTCTGCTC GGAAGTTCGC GGCCGATGCC GCTCGGCAAG
ACCATCGGCG CGGCGATGAT CATCCTGATC GCCGGGATGG CGATGATGGT TCTGACCAAG
GTGCTCGGCG ACCGCCCGGC GCCATTTCTG CTGATCCTGG GGCTGACCTA TTTTGCGTGC
TTCGCCGCAC AGTCGACGGG AAAGGGAGGA CCGGCCGTCT TTCTCGTGCT CGTCGTTTCG
ATCATCGTGC CTCTGCTCGG CATCCTGAAC AAGGAGCTCG CCAATTCCAT CCTGTCCATC
CTGGTCGCCG GGGTGTTGTC CGGCACGGCT CTGATGTGGT TCGCCCATGC GGTCTTTCCC
GAGCCGTTCT CCCTGGAGGT TGAGGCGGTG GCGATCGACG AGCGGCCGCC GGCCTTGCTT
CGGGCGCTGG CAAACACGGT CATCCTTTTG GGCTCCGTCG TGATCTGCCT GACGAGCGAC
AACCTGACCG CTGCGGCGGT CATTCCGATC ACTGTTGCTT CGCTGCTCGG GCAGCTCGAC
GTTGCCGCGA GTGCGCGAGT GGCGATCGGG CTCGTGCTCG TCAACCTGTT CGGCGGAGTG
CTCGCCTCCG TTGCCTATGC CGCGCTATCG CTGCGCCCCA ATCTTTTCTC GATCTTCCTC
ATCGTTCTCG TCGTCGTCCT CCTCATCGGA GGGCGCGCGG CTGGTCGCTC GAAGGACGCC
CCGGTTTTTG CCGGCGCCCT GACAACCTTC CTGATCCTGT TCGGCCTCGG GGTCTCGCCT
CTGCCGGGGA GTGCTGCAGA ATCCTTCGCG ACCCGCATCG TCTATGTCGC AGCGGCCTTG
ATCTACGCGC TGCTGTTTGC CGTCATCCTG TGGCCGCGGA CGAGGGAAAC GAAGAGGATA
TCGGCATGA
 
Protein sequence
MSAERSLAVE EQKRKGLRVA FAVSIGFTLA VYAGAIVPFL GPLFAAQFLL GSSRPMPLGK 
TIGAAMIILI AGMAMMVLTK VLGDRPAPFL LILGLTYFAC FAAQSTGKGG PAVFLVLVVS
IIVPLLGILN KELANSILSI LVAGVLSGTA LMWFAHAVFP EPFSLEVEAV AIDERPPALL
RALANTVILL GSVVICLTSD NLTAAAVIPI TVASLLGQLD VAASARVAIG LVLVNLFGGV
LASVAYAALS LRPNLFSIFL IVLVVVLLIG GRAAGRSKDA PVFAGALTTF LILFGLGVSP
LPGSAAESFA TRIVYVAAAL IYALLFAVIL WPRTRETKRI SA