Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2396 |
Symbol | |
ID | 8013381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 2397197 |
End bp | 2398225 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644824977 |
Product | putative transmembrane protein |
Protein accession | YP_002976207 |
Protein GI | 241205111 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.296923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00231835 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCGCTG AGAGGAGCCT CGCGGTCGAG GAGCAGAAAC GCAAAGGGCT GCGGGTTGCG TTCGCGGTCT CGATCGGCTT CACGCTCGCA GTCTATGCGG GGGCCATTGT GCCCTTCCTC GGTCCGCTCT TTGCCGCCCA GTTTCTGCTC GGAAGTTCGC GGCCGATGCC GCTCGGCAAG ACCATCGGCG CGGCGATGAT CATCCTGATC GCCGGGATGG CGATGATGGT TCTGACCAAG GTGCTCGGCG ACCGCCCGGC GCCATTTCTG CTGATCCTGG GGCTGACCTA TTTTGCGTGC TTCGCCGCAC AGTCGACGGG AAAGGGAGGA CCGGCCGTCT TTCTCGTGCT CGTCGTTTCG ATCATCGTGC CTCTGCTCGG CATCCTGAAC AAGGAGCTCG CCAATTCCAT CCTGTCCATC CTGGTCGCCG GGGTGTTGTC CGGCACGGCT CTGATGTGGT TCGCCCATGC GGTCTTTCCC GAGCCGTTCT CCCTGGAGGT TGAGGCGGTG GCGATCGACG AGCGGCCGCC GGCCTTGCTT CGGGCGCTGG CAAACACGGT CATCCTTTTG GGCTCCGTCG TGATCTGCCT GACGAGCGAC AACCTGACCG CTGCGGCGGT CATTCCGATC ACTGTTGCTT CGCTGCTCGG GCAGCTCGAC GTTGCCGCGA GTGCGCGAGT GGCGATCGGG CTCGTGCTCG TCAACCTGTT CGGCGGAGTG CTCGCCTCCG TTGCCTATGC CGCGCTATCG CTGCGCCCCA ATCTTTTCTC GATCTTCCTC ATCGTTCTCG TCGTCGTCCT CCTCATCGGA GGGCGCGCGG CTGGTCGCTC GAAGGACGCC CCGGTTTTTG CCGGCGCCCT GACAACCTTC CTGATCCTGT TCGGCCTCGG GGTCTCGCCT CTGCCGGGGA GTGCTGCAGA ATCCTTCGCG ACCCGCATCG TCTATGTCGC AGCGGCCTTG ATCTACGCGC TGCTGTTTGC CGTCATCCTG TGGCCGCGGA CGAGGGAAAC GAAGAGGATA TCGGCATGA
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Protein sequence | MSAERSLAVE EQKRKGLRVA FAVSIGFTLA VYAGAIVPFL GPLFAAQFLL GSSRPMPLGK TIGAAMIILI AGMAMMVLTK VLGDRPAPFL LILGLTYFAC FAAQSTGKGG PAVFLVLVVS IIVPLLGILN KELANSILSI LVAGVLSGTA LMWFAHAVFP EPFSLEVEAV AIDERPPALL RALANTVILL GSVVICLTSD NLTAAAVIPI TVASLLGQLD VAASARVAIG LVLVNLFGGV LASVAYAALS LRPNLFSIFL IVLVVVLLIG GRAAGRSKDA PVFAGALTTF LILFGLGVSP LPGSAAESFA TRIVYVAAAL IYALLFAVIL WPRTRETKRI SA
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