Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2385 |
Symbol | |
ID | 8015678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 2389788 |
End bp | 2390729 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644824966 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002976196 |
Protein GI | 241205100 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0284947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00966213 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATATGGG GTTATAAATC AGAAAAATTG AAAGATGCGA CGATGAGCAT TCCATTTCGC CGTCCCATTC CGCTGCTTGA CAACGAAGTG CTGCGTACCT TCGTGGCTAT CGCCGAGACA GGCAATTTTT CGACCGCCGC CGAGGCGGTC TTCCGTACGC CGTCGGCAGT GTCGATGCAG ATCAAGAAGC TTGAAGAGCA ACTGGGGGCA ACGCTGTTTC TGCGCGACGC CCGTTCGGTG TCGCTGACAC GCCACGGCGA GATGTTGCTA TCCTATGCGC GCAACATGCT GGCGCTGTCG AACGAGGCGG TGTCGCGCTT CATCATGCCG GAACTCAGCG GCGTCGTGCG GCTCGGCGCG CCGGAAGATA TCGGCGAACG GCTGCTACCG AGCATCCTGA AGAGTTTTGC CGAAAGCTAT CCCGGCATCA TGGTCGACGT GACCATCGAC ATGAGCATCG GGCTGAAGAA GCGCATGGAG GAGCAGCGGC TCGACTTGGC CTTGATCAAC TGTGCGACAC GGCCGTTCCC GACGGGCGGA GAGGTGGTGT TCCGCGAGCG GCTGGTCTGG GCTGGCGCCA AGTGCGGTTC GGCGCATCGC CGCGATCCGC TGCCGATCTC GATCTGGGAA GACGGCTGCA TCTGGCGCCA GGAGGCGCTC TGCCAGCTCG AACGCAACAA GCGGCATTAT CGCGTCGCCT ATCTCAGCGG CCACACGATG GCGCAGCGCG CCGCCGTGCT TTCCGATCTC GCCATCGCGC CGTTGCCGCT GTCCTATGTC AACGAAGACA TGGCGATCCT CGGGCCTCAG GAAGGGCTGC CGGAACTCGG CGCCTTCGAT ATCCGCCTGC TGACCGCCTC GCAGGTGTCG GGGCCGATCG AGACGGTGGC TGACAGCATT CGCGGCGCCT TTGCCGAGAG AGCAAAGGCG GTCGCCGCCT AG
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Protein sequence | MIWGYKSEKL KDATMSIPFR RPIPLLDNEV LRTFVAIAET GNFSTAAEAV FRTPSAVSMQ IKKLEEQLGA TLFLRDARSV SLTRHGEMLL SYARNMLALS NEAVSRFIMP ELSGVVRLGA PEDIGERLLP SILKSFAESY PGIMVDVTID MSIGLKKRME EQRLDLALIN CATRPFPTGG EVVFRERLVW AGAKCGSAHR RDPLPISIWE DGCIWRQEAL CQLERNKRHY RVAYLSGHTM AQRAAVLSDL AIAPLPLSYV NEDMAILGPQ EGLPELGAFD IRLLTASQVS GPIETVADSI RGAFAERAKA VAA
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