| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2257 |
|---|
| Symbol | |
|---|
| ID | 8013260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 2262795 |
|---|
| End bp | 2263724 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644824843 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_002976073 |
|---|
| Protein GI | 241204977 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.876756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.048401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG CGCGCACCAT GCTCGCGTCT GCTGCCCTGC TCGGTCTCAT GCTCGGCCCA
GTACACGCGG CGGAACTGAA GAAGCTCGGC TTGGCCGTTG CCAACCTTCA GGCAAACTTC
TTCAACCAGA TCAAACAATC CGTCGAAGCC GAAGCCAAGA AGCGCGGCAT CGAAGTCATC
ACGGTCGACG CAAAGGGCGA CGGGCCGACG CAGGTCAACC AGATCCAGGA CCTCCTGACC
CAGAAGATCG ACGCGCTGAT CTACATTCCG GCAGGTGCGG CGGCTGCGAC CGTTCCGGTC
AAGCTCGCCA AGAGCGCTGG TATTCCGGTC GTGAACGTTG ACCGCAACGC CGAGGGAGCA
CCGGGCGATA CCTTCCTTGC AACGGATTCC GTCGCGTCTG CCAAGGCCGT GTGCGACTAC
ATTCTGAAGG AAGCCGGCGG CAAGGGGAAG ATGGTCATCA TCCACGGCCA GAAGGGCACA
ACGCCGGAAG TCGATCGTTC GAAGGGTTGC GCTGAATCTC TCAAGGCATA TCCGGACGTC
AAGGTTGTCG CCGAGCAGTT CTCGAACATC TGGAGCCAGG ACGAAGGATT CCAGATCATG
CAGAATATGC TGCAGGCAAA TCCGGACGTT TCGATCGTGT TCGCCCAGGC CGACGGCCTT
GCCCTTGGCG CCGCGCAGGC GATCAAGGTC GCCAATCCTT CCCAGAAGAT CGTGGTTGGC
GGCTTCGATG GTGACACCGC AGCTCTCGAA GCGCTCAGCA AGGGTGTCTT CAACGTAACG
GCGACCCAGC AGACGCAGAA GATGGGCCGC GACGCGGTTG AAAACGCCGC CAAGCTTGTC
GCCGGAGAAA AGGTGCCGCC GGTCCAGCTC CTGGATGCCA CGCTGACAAC CAAGGAAAAC
GTCGCAGGCT TCATCGCCAA CCATCCGTAA
|
|---|
| Protein sequence | MKIARTMLAS AALLGLMLGP VHAAELKKLG LAVANLQANF FNQIKQSVEA EAKKRGIEVI
TVDAKGDGPT QVNQIQDLLT QKIDALIYIP AGAAAATVPV KLAKSAGIPV VNVDRNAEGA
PGDTFLATDS VASAKAVCDY ILKEAGGKGK MVIIHGQKGT TPEVDRSKGC AESLKAYPDV
KVVAEQFSNI WSQDEGFQIM QNMLQANPDV SIVFAQADGL ALGAAQAIKV ANPSQKIVVG
GFDGDTAALE ALSKGVFNVT ATQQTQKMGR DAVENAAKLV AGEKVPPVQL LDATLTTKEN
VAGFIANHP
|
|---|
| |